Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 SNORA71.2-201ENST00000364941 134 ntBASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 CYCSP24-201ENST00000445119 316 ntBASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 U3.53-201ENST00000628922 216 ntBASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 AC092451.3-201ENST00000625067 1343 ntBASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 ZNF137P-201ENST00000456718 1920 ntBASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 CCAT2-201ENST00000630920 1752 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AL031119.1-201ENST00000404707 1879 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC093297.3-201ENST00000607056 2517 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 RN7SKP224-201ENST00000364140 325 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AL590762.2-201ENST00000395798 571 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AL358176.3-201ENST00000420757 454 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC108751.3-201ENST00000461814 1020 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC073358.1-201ENST00000505671 684 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC006130.2-201ENST00000586202 326 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 ADAM24P-201ENST00000398655 2101 ntBASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHANK2Q9UPX8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AL451139.1-201ENST00000434718 346 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AC128716.1-201ENST00000475129 166 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 MYL12BP2-201ENST00000503948 512 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AC015795.1-201ENST00000513669 327 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 MIR4444-1-201ENST00000581696 74 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 MIR4444-2-201ENST00000584390 74 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 OR7A19P-201ENST00000608051 733 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AC006133.1-201ENST00000617106 264 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 TTC41P-205ENST00000551270 3963 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AP001029.2-203ENST00000589795 4910 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AL360270.2-201ENST00000562952 5985 ntBASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHANK2Q9UPX8 RPL5P2-201ENST00000429598 854 ntBASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 RPL35AP21-201ENST00000437667 333 ntBASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 MIR3138-201ENST00000585238 82 ntBASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 AL731566.1-201ENST00000620490 1937 ntBASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 RAD17P1-201ENST00000418130 2042 ntBASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 CYP1D1P-201ENST00000416662 1433 ntBASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 SAMMSON-210ENST00000641260 1308 ntBASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC7.05□□□□□ -1.28
SHANK2Q9UPX8 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 PCNPP4-201ENST00000414817 517 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 RNA5SP143-201ENST00000516936 115 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AC105031.1-201ENST00000518550 476 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 AL034370.1-201ENST00000397254 1590 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 OR51H2P-202ENST00000641424 3046 ntBASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SHANK2Q9UPX8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms