Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 HMGB1P51-201ENST00000605166 638 ntBASIC5.12□□□□□ -1.59
SPASTQ9UBP0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 AC100827.5-201ENST00000615883 426 ntBASIC5.12□□□□□ -1.59
SPASTQ9UBP0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPASTQ9UBP0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 INTS6P1-201ENST00000504674 2530 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 RNA5SP123-201ENST00000363244 119 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 RN7SKP153-201ENST00000365026 316 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 OR6K4P-201ENST00000423179 955 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC022022.1-201ENST00000430304 178 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 MTCYBP29-201ENST00000436327 1006 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 SUMO2P1-206ENST00000445436 284 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 NDUFA5P8-201ENST00000449019 346 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 snoU13.20-201ENST00000459180 104 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 IMPA1P1-201ENST00000510718 842 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 RNU6-551P-201ENST00000516661 103 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 BRD9P1-201ENST00000529855 560 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 EDDM3DP-201ENST00000554692 434 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC022387.2-201ENST00000604050 448 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC023813.4-201ENST00000607580 580 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 SMG1P4-204ENST00000523028 4131 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 ADAM5-202ENST00000399789 1942 ntBASIC5.11□□□□□ -1.59
SPASTQ9UBP0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPASTQ9UBP0 AC073136.1-201ENST00000449426 2884 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 RNA5SP443-201ENST00000363083 132 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AL035419.1-201ENST00000397037 564 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 GJA6P-201ENST00000415117 1042 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AL691447.1-201ENST00000419456 387 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 OR6C64P-201ENST00000419708 825 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 EI24P4-201ENST00000423683 1078 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 RPS4XP12-201ENST00000461747 709 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 HMGN2P25-201ENST00000486956 268 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 RPS24P16-201ENST00000497294 392 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AC006427.1-201ENST00000514359 712 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 snoU109.6-201ENST00000516831 118 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 OR5AZ1P-201ENST00000527448 943 ntBASIC5.1□□□□□ -1.59
SPASTQ9UBP0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPASTQ9UBP0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms