Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AP005262.1-201ENST00000582646 997 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL031985.2-201ENST00000600955 480 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL360012.1-201ENST00000602813 131 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC018714.1-201ENST00000605028 208 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC090425.2-201ENST00000608818 501 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 HULC.1-201ENST00000612720 240 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC243654.2-201ENST00000612843 443 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL080312.2-201ENST00000613001 630 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL136981.2-201ENST00000617319 734 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL355480.1-201ENST00000629041 99 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 CASC19-222ENST00000641321 1173 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 DBF4P1-201ENST00000412976 1892 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC011447.7-201ENST00000624228 1590 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 SNORD35A-201ENST00000363389 86 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 MIR1282-201ENST00000408865 101 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 TPT1P2-201ENST00000413105 503 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 TIMM9P2-201ENST00000419324 266 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 SKP1P3-201ENST00000429280 487 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 RPS10P21-201ENST00000430654 475 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC129850.1-201ENST00000436203 508 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 RPL37P3-201ENST00000456825 293 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 snoU13.29-201ENST00000459370 104 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 NCOR1P1-202ENST00000486162 291 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AP001189.2-201ENST00000527320 189 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC023161.2-201ENST00000551218 780 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC037479.1-201ENST00000558361 625 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AP001267.4-201ENST00000602598 545 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC011891.2-201ENST00000604949 397 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC004948.1-201ENST00000609858 672 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 AC008083.4-201ENST00000615076 444 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 MIR6778-201ENST00000617912 73 ntBASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM55Q9BYV6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC092692.1-201ENST00000623625 2595 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 CASC19-204ENST00000641001 2055 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC097461.1-201ENST00000568928 2821 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 CR381670.1-201ENST00000624291 1693 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RNA5SP140-201ENST00000364524 92 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RNU6-1151P-201ENST00000384684 107 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 SNORD116-4-201ENST00000384733 96 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 VIM2P-201ENST00000402383 1294 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AL031577.2-201ENST00000404133 280 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms