Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.21□□□□□ -1.25
SCAPERQ9BY12 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
SCAPERQ9BY12 ADAM24P-201ENST00000398655 2101 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AC017079.1-201ENST00000333650 415 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AL359837.1-201ENST00000381357 287 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 MIR659-201ENST00000384963 97 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 RN7SKP267-201ENST00000410381 285 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 GPS2P1-201ENST00000411761 986 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AL356387.2-201ENST00000422272 243 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 RPL7AP25-201ENST00000423357 805 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 OR4C10P-201ENST00000434991 931 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AP000843.1-201ENST00000624880 701 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 AC125257.1-201ENST00000560400 2930 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.2□□□□□ -1.26
SCAPERQ9BY12 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SCAPERQ9BY12 OR1L6-202ENST00000373684 1044 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 RPL36AP36-201ENST00000418616 301 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 RPS12P10-201ENST00000427031 377 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 VTI1BP4-201ENST00000427516 527 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 RPS17P8-201ENST00000434525 335 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 AC090602.1-201ENST00000469695 252 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 AC022034.3-201ENST00000471393 478 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 MIR4429-201ENST00000580105 73 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 RNA5SP196-201ENST00000625967 102 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 CASC19-255ENST00000641733 1385 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 UGT2B26P-201ENST00000508672 1613 ntBASIC7.19□□□□□ -1.26
SCAPERQ9BY12 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SCAPERQ9BY12 AL121657.1-201ENST00000327215 531 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 ATP5F1P2-201ENST00000398143 760 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC073052.1-201ENST00000440417 714 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 RN7SL303P-201ENST00000469773 251 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC023424.1-201ENST00000496058 459 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 RN7SL558P-201ENST00000497468 299 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 MED28P5-201ENST00000528254 438 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC025884.1-201ENST00000556034 378 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC116553.2-201ENST00000564203 463 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 ARF4P1-201ENST00000605447 541 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 RN7SKP280-201ENST00000364196 304 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 RNU1-13P-201ENST00000384499 162 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 FTH1P16-201ENST00000435241 552 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 CREM-230ENST00000474931 626 ntTSL 2 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 IGLVIV-65-201ENST00000517313 360 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms