Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 AC015722.2-201ENST00000622210 551 ntBASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 AP002505.2-201ENST00000623585 696 ntBASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 AC114546.4-201ENST00000624413 369 ntBASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 AC007485.2-201ENST00000623493 1667 ntBASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 AC138393.1-206ENST00000540997 1886 ntBASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSBP3Q9BWW4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 CASC19-280ENST00000642102 1351 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC074141.1-201ENST00000588129 2995 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RNA5SP512-201ENST00000364550 120 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 PSMA6P1-201ENST00000400275 741 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RPL5P20-201ENST00000403848 896 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RNA5SP80-201ENST00000410475 111 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RN7SKP56-201ENST00000410513 331 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RNU2-18P-201ENST00000411224 162 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RPL21P32-201ENST00000419877 477 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 FAM96AP1-201ENST00000430879 482 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC003989.1-201ENST00000434569 565 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MTND1P28-201ENST00000435623 950 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 GDI2P2-201ENST00000445131 608 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MTND4P19-201ENST00000446659 478 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MTND1P18-201ENST00000448191 573 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 HMGB1P5-202ENST00000451497 985 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MTND6P6-201ENST00000478031 263 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC068522.1-201ENST00000482895 345 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 H3F3AP3-201ENST00000497682 407 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 FTH1P8-201ENST00000498161 514 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC117522.3-201ENST00000507974 584 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC083906.1-201ENST00000509298 406 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC106872.4-201ENST00000510050 523 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 SETP21-201ENST00000514799 892 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RN7SKP183-201ENST00000517169 324 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AP002453.2-201ENST00000533503 320 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC023968.1-201ENST00000560719 475 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AP001836.1-201ENST00000604675 523 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AP000942.4-201ENST00000604811 241 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC002553.4-201ENST00000616896 331 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 MIR6085-201ENST00000618314 110 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC009159.1-201ENST00000618386 642 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 CASC19-228ENST00000641414 1684 ntBASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSBP3Q9BWW4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms