Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL008729.2-201ENST00000606393 473 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC015982.1-201ENST00000608113 465 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC007683.2-201ENST00000624681 714 ntBASIC4.84□□□□□ -1.63
PTP4A1Q93096 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PTP4A1Q93096 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTP4A1Q93096 AC026523.2-201ENST00000625039 7739 ntBASIC4.84□□□□□ -1.64
PTP4A1Q93096 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
PTP4A1Q93096 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
PTP4A1Q93096 CASC19-204ENST00000641001 2055 ntBASIC4.84□□□□□ -1.64
PTP4A1Q93096 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC092162.3-201ENST00000624511 1624 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC006042.3-201ENST00000454684 1469 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC114786.1-201ENST00000512892 1415 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC022417.1-201ENST00000624768 1303 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 RNU1-19P-201ENST00000363306 165 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 SNORA16A-201ENST00000384342 137 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 MTND2P8-201ENST00000450555 1025 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 RPEP1-201ENST00000504507 658 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 SNORD116-26-201ENST00000516006 96 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AF186190.1-201ENST00000517470 480 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 SNRPGP1-201ENST00000553864 222 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC090888.3-201ENST00000558917 509 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 LINC00557-201ENST00000563184 1279 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 MRPS21P7-201ENST00000566937 238 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 NF1P5-201ENST00000588287 448 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC027243.2-201ENST00000602530 724 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC079610.2-201ENST00000604818 690 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AL354696.1-201ENST00000614652 497 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC008115.3-201ENST00000614874 549 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC003001.2-201ENST00000616294 831 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AL645927.2-201ENST00000618350 349 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 U6.48-201ENST00000618523 106 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC090617.9-201ENST00000623751 147 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AC008691.1-209ENST00000642094 814 ntBASIC4.83□□□□□ -1.64
PTP4A1Q93096 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTP4A1Q93096 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTP4A1Q93096 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTP4A1Q93096 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTP4A1Q93096 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTP4A1Q93096 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTP4A1Q93096 RN7SKP292-201ENST00000365522 317 ntBASIC4.82□□□□□ -1.64
PTP4A1Q93096 AC007618.1-201ENST00000366455 732 ntBASIC4.82□□□□□ -1.64
PTP4A1Q93096 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTP4A1Q93096 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 RNA5SP122-201ENST00000384457 108 ntBASIC4.82□□□□□ -1.64
PTP4A1Q93096 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.82□□□□□ -1.64
PTP4A1Q93096 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms