Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Y_RNA.169-201ENST00000363745 96 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC092638.1-201ENST00000411966 1275 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AL133482.1-201ENST00000415988 498 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 MFSD13B-201ENST00000420133 1290 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.37□□□□□ -1.39
ERCC4Q92889 NDUFS5P5-201ENST00000437256 321 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AL138787.1-202ENST00000437804 898 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.37□□□□□ -1.39
ERCC4Q92889 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.37□□□□□ -1.39
ERCC4Q92889 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.37□□□□□ -1.39
ERCC4Q92889 MEMO1P4-201ENST00000453590 386 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC073610.1-201ENST00000489971 396 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC034244.1-201ENST00000507687 207 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 RNA5SP438-201ENST00000516561 112 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 OR4A2P-201ENST00000527276 913 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC079905.1-201ENST00000549280 475 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC015802.2-201ENST00000589690 189 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC067838.1-201ENST00000606064 577 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AL136131.3-201ENST00000607600 188 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC007349.4-201ENST00000608114 532 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AL360219.1-201ENST00000610230 366 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 AC092140.2-201ENST00000618027 521 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 RPL23AP61-201ENST00000623642 466 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC139713.2-210ENST00000641741 992 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC4Q92889 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.37□□□□□ -1.39
ERCC4Q92889 AC009962.1-201ENST00000567327 3813 ntBASIC6.37□□□□□ -1.39
ERCC4Q92889 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.37□□□□□ -1.39
ERCC4Q92889 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
ERCC4Q92889 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 AC245100.2-201ENST00000454544 1679 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 ABCC13-202ENST00000463099 3842 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.36□□□□□ -1.39
ERCC4Q92889 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ERCC4Q92889 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 RNA5SP433-201ENST00000364491 114 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.36□□□□□ -1.39
ERCC4Q92889 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 BX284632.2-201ENST00000421091 399 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 OR10T1P-201ENST00000424327 947 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC002069.1-201ENST00000429649 1159 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC126120.1-201ENST00000431082 470 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AL512605.1-202ENST00000441919 381 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AL359955.2-201ENST00000445380 353 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 MRPL35P4-201ENST00000453682 566 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AC126121.1-201ENST00000482313 553 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC004815.1-201ENST00000484185 331 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC079203.1-201ENST00000487972 404 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC009120.1-201ENST00000493458 473 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.36□□□□□ -1.39
ERCC4Q92889 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC114781.3-201ENST00000512083 142 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.36□□□□□ -1.39
ERCC4Q92889 RNA5SP303-201ENST00000516192 130 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.36□□□□□ -1.39
ERCC4Q92889 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.36□□□□□ -1.39
ERCC4Q92889 WBP1LP3-201ENST00000523033 208 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC005363.1-201ENST00000530779 351 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AP001804.2-201ENST00000533932 910 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 GCSHP4-201ENST00000538792 439 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms