Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HSPD1P16-201ENST00000402302 394 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 MTCO1P51-201ENST00000427672 1060 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP3S1Q92572 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 AC010350.1-201ENST00000504908 231 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.22□□□□□ -1.73
AP3S1Q92572 UGT2A3P7-201ENST00000510485 734 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AC008694.2-201ENST00000517591 306 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AC090151.1-201ENST00000520784 730 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
AP3S1Q92572 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.22□□□□□ -1.73
AP3S1Q92572 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.22□□□□□ -1.73
AP3S1Q92572 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.22□□□□□ -1.73
AP3S1Q92572 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.22□□□□□ -1.73
AP3S1Q92572 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.22□□□□□ -1.73
AP3S1Q92572 AC008966.2-201ENST00000606157 453 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AC090948.2-201ENST00000607363 564 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AC023509.5-201ENST00000617434 807 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 MIR6829-201ENST00000620375 67 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AC008758.3-201ENST00000507003 1829 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 AL136164.3-201ENST00000624429 3978 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 CASC19-281ENST00000642118 1554 ntBASIC4.22□□□□□ -1.73
AP3S1Q92572 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.21□□□□□ -1.73
AP3S1Q92572 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.21□□□□□ -1.73
AP3S1Q92572 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.21□□□□□ -1.74
AP3S1Q92572 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.21□□□□□ -1.74
AP3S1Q92572 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
AP3S1Q92572 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
AP3S1Q92572 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
AP3S1Q92572 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
AP3S1Q92572 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 MIR191-201ENST00000384873 92 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AC093719.1-202ENST00000392735 373 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 GSTM3P2-201ENST00000412746 530 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 ATG4AP1-201ENST00000416893 538 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AC093155.2-201ENST00000420734 937 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 RPS12P5-201ENST00000423449 371 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 RPS26P47-201ENST00000427219 348 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AL353597.2-202ENST00000434901 373 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 PRPF38AP2-201ENST00000438179 851 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 EIF4A1P11-201ENST00000451239 222 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 FGF7P3-201ENST00000454645 303 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.21□□□□□ -1.74
AP3S1Q92572 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 AC138866.2-201ENST00000508650 584 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 RNU6-943P-201ENST00000516960 98 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.21□□□□□ -1.74
AP3S1Q92572 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.21□□□□□ -1.74
AP3S1Q92572 AC069240.1-201ENST00000548774 375 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AC068446.3-201ENST00000555285 382 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 TVP23CP2-201ENST00000571473 623 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC4.21□□□□□ -1.74
AP3S1Q92572 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.21□□□□□ -1.74
AP3S1Q92572 HSPD1P11-201ENST00000508643 1702 ntBASIC4.21□□□□□ -1.74
AP3S1Q92572 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP3S1Q92572 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP3S1Q92572 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP3S1Q92572 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
AP3S1Q92572 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP3S1Q92572 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.2□□□□□ -1.74
AP3S1Q92572 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP3S1Q92572 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
AP3S1Q92572 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP3S1Q92572 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.2□□□□□ -1.74
AP3S1Q92572 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP3S1Q92572 OR52B3P-201ENST00000314715 928 ntBASIC4.2□□□□□ -1.74
AP3S1Q92572 RN7SKP114-201ENST00000410327 279 ntBASIC4.2□□□□□ -1.74
AP3S1Q92572 RNA5SP231-201ENST00000410496 138 ntBASIC4.2□□□□□ -1.74
AP3S1Q92572 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.2□□□□□ -1.74
AP3S1Q92572 AL133325.1-201ENST00000421090 382 ntBASIC4.2□□□□□ -1.74
AP3S1Q92572 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
AP3S1Q92572 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.2□□□□□ -1.74
AP3S1Q92572 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.2□□□□□ -1.74
AP3S1Q92572 EIF1P7-201ENST00000487533 337 ntBASIC4.2□□□□□ -1.74
AP3S1Q92572 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.2□□□□□ -1.74
AP3S1Q92572 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms