Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU1-82P-201ENST00000390851 165 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 RNU6-316P-201ENST00000391027 107 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 RPL32P23-201ENST00000397237 405 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AL591848.1-201ENST00000413092 322 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNED1Q8TER0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 RPL5P2-201ENST00000429598 854 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC073052.1-201ENST00000440417 714 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 RN7SL517P-201ENST00000462240 305 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNED1Q8TER0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 NPM1P6-201ENST00000521088 871 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 AP000619.2-201ENST00000546014 969 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC007224.1-201ENST00000564410 144 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 RNA5SP439-201ENST00000617595 124 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 AC002044.3-201ENST00000623314 541 ntBASIC5.81□□□□□ -1.48
SNED1Q8TER0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.81□□□□□ -1.48
SNED1Q8TER0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 AL669831.5-218ENST00000591702 1873 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 AC133552.1-201ENST00000569988 4007 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 COX5BP7-201ENST00000414780 274 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 CDC27P1-201ENST00000445384 715 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 SLC25A15P5-201ENST00000508033 253 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 AC007016.1-201ENST00000512110 244 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 AL445567.2-201ENST00000618935 498 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 AL157762.1-201ENST00000619612 415 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNED1Q8TER0 AC005261.2-201ENST00000593427 4258 ntBASIC5.8□□□□□ -1.48
SNED1Q8TER0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.8□□□□□ -1.48
SNED1Q8TER0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC123912.3-201ENST00000600907 1367 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 ASNSP1-204ENST00000641977 1664 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 RPS17P8-201ENST00000434525 335 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 UBE2V2P4-201ENST00000447495 259 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 AL162591.2-201ENST00000449634 317 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 OR5D2P-201ENST00000524390 911 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC006518.1-201ENST00000541449 943 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC093249.4-201ENST00000564755 259 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC106785.1-201ENST00000565935 262 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC069061.3-201ENST00000582254 823 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AL133338.2-201ENST00000604292 736 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC090948.1-201ENST00000607464 549 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC024941.1-201ENST00000612250 334 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 AL161637.1-201ENST00000622380 412 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.79□□□□□ -1.48
SNED1Q8TER0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNED1Q8TER0 AC009643.2-201ENST00000603543 1448 ntBASIC5.79□□□□□ -1.48
SNED1Q8TER0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms