Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RPS27P18-201ENST00000431701 247 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 MAPRE1P3-201ENST00000435438 796 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC000111.2-201ENST00000448200 210 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC093166.2-201ENST00000455969 1017 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 RPS3AP41-201ENST00000462701 778 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 RPL7P16-201ENST00000479738 738 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC105031.1-201ENST00000518550 476 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 MORF4L1P3-201ENST00000525966 950 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC116158.1-201ENST00000560231 2129 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC009268.1-201ENST00000561352 1203 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC009117.1-201ENST00000563948 554 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 FAM60CP-201ENST00000591086 664 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC020910.3-201ENST00000603701 874 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC087783.2-201ENST00000605070 562 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC100814.1-201ENST00000606963 623 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC107308.1-201ENST00000615897 301 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AL590410.1-201ENST00000617925 333 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 BX005214.3-202ENST00000619809 325 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AP000648.2-201ENST00000624182 404 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 RN7SKP149-201ENST00000363008 344 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 RNU6-819P-201ENST00000364116 107 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC104837.2-201ENST00000427236 424 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 RPL31P44-201ENST00000447680 377 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 RPS3AP53-201ENST00000454716 778 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 RPL35AP28-201ENST00000459730 331 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 RPL23AP56-201ENST00000460778 453 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 GAPDHP56-201ENST00000506031 988 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC026688.1-201ENST00000520639 1168 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 BRD9P1-201ENST00000529855 560 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 OR5D15P-201ENST00000531671 942 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 EDDM3DP-201ENST00000554692 434 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 MIR3934-201ENST00000579806 107 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC000374.1-201ENST00000434698 1745 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 AC092111.2-201ENST00000611627 1414 ntBASIC4.55□□□□□ -1.68
C9orf40Q8IXQ3 DDX18P6-201ENST00000450119 1997 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 MUC2-202ENST00000613187 4845 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AC083799.1-201ENST00000366451 910 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL392003.1-201ENST00000434394 243 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 RPL35AP21-201ENST00000437667 333 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 OR52J1P-201ENST00000450596 932 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL645937.3-201ENST00000453647 936 ntBASIC4.54□□□□□ -1.68
C9orf40Q8IXQ3 AL356981.1-201ENST00000454879 684 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms