Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 RFPL4AP3-201ENST00000515267 345 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 CD24P2-201ENST00000565486 219 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC068790.5-201ENST00000602741 355 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC008638.3-201ENST00000603341 463 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC078899.5-201ENST00000612475 178 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC006453.5-201ENST00000636451 619 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 AC009643.2-201ENST00000603543 1448 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
CCDC58Q4VC31 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.37□□□□□ -1.71
CCDC58Q4VC31 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 PANDAR-201ENST00000629595 1506 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 HCFC2P1-201ENST00000392864 1592 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 OR56A4-201ENST00000330728 1209 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 RN7SKP114-201ENST00000410327 279 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 RAC1P3-201ENST00000416129 580 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC004552.1-201ENST00000419089 348 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 BX323845.1-201ENST00000432417 179 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 RPL23AP19-201ENST00000436229 369 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 RPS27AP2-201ENST00000457576 465 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 RPS26P3-201ENST00000470205 348 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC098583.1-201ENST00000480875 255 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC090543.2-201ENST00000483963 348 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC004057.1-201ENST00000485827 348 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC015864.1-201ENST00000496512 544 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 RNA5SP473-201ENST00000516402 125 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC112191.2-201ENST00000522428 333 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC025946.2-201ENST00000603398 234 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AL669942.2-201ENST00000620352 697 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 MAPK10-304ENST00000641341 3984 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC58Q4VC31 ECM1P2-201ENST00000503354 1577 ntBASIC4.36□□□□□ -1.71
CCDC58Q4VC31 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RNU6-1320P-201ENST00000390838 107 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RNU6-1269P-201ENST00000391139 107 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 OR7E156P-201ENST00000400303 464 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RPS3P2-201ENST00000421346 701 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RGS17P1-201ENST00000423358 553 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC108075.1-201ENST00000424692 529 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC115283.1-201ENST00000427353 400 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms