Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNA5SP345-201ENST00000410646 108 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 SEPT7P8-201ENST00000413308 775 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 C4BPAP2-201ENST00000428434 478 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 AL359265.2-201ENST00000434367 631 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 CYCSP42-201ENST00000450823 238 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 OR52Y1P-201ENST00000452418 828 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 RNU6-599P-201ENST00000459383 107 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 RNU6-1193P-201ENST00000459461 107 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 RN7SL441P-201ENST00000492388 296 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 MIR4675-201ENST00000577898 77 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 RNU6-368P-201ENST00000620928 107 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 RNU6-538P-201ENST00000622329 107 ntBASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SHROOM1Q2M3G4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AC010132.2-201ENST00000295493 1043 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 RPL32P3-201ENST00000359025 275 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 U3.22-201ENST00000391120 215 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 RAB28P1-201ENST00000411517 641 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 BX119904.3-201ENST00000428194 957 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 OR6C71P-201ENST00000432580 913 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 NPM1P18-201ENST00000434232 732 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 CYCSP11-201ENST00000436426 315 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 SLC25A18P1-201ENST00000449385 454 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AL591623.2-201ENST00000449978 222 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 RPL7AP10-201ENST00000481016 791 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AC016687.1-201ENST00000482574 353 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 RNU2-30P-201ENST00000516209 141 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 TVP23CP2-201ENST00000571473 623 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 RN7SL690P-201ENST00000582087 240 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 MIR4697-201ENST00000582977 78 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 PRPF19P1-201ENST00000584766 898 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 FAM27B-201ENST00000610601 213 ntBASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM1Q2M3G4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHROOM1Q2M3G4 TCP11X1-202ENST00000622971 1372 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 SETP10-201ENST00000424368 814 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 GSTA7P-201ENST00000438425 448 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 OR52A4P-201ENST00000472867 958 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 RN7SL481P-201ENST00000477764 299 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC022726.1-201ENST00000587475 207 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 RNA5SP439-201ENST00000617595 124 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AC019206.1-201ENST00000621938 425 ntBASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM1Q2M3G4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms