Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 GSTP1P1-201ENST00000548078 319 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC090888.3-201ENST00000558917 509 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC116553.2-201ENST00000564203 463 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AL359513.1-201ENST00000614364 557 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 SNX18P1Y-201ENST00000616231 511 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AL512356.3-201ENST00000623005 461 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AP002505.2-201ENST00000623585 696 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 AC138627.1-204ENST00000641894 765 ntBASIC3.8□□□□□ -1.8
HIST1H1AQ02539 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HIST1H1AQ02539 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 RNA5SP132-201ENST00000364725 118 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 HMGB3P7-201ENST00000400214 611 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL139039.2-201ENST00000407436 479 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 MIR1182-201ENST00000408363 97 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 TMBIM7P-201ENST00000418074 855 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 PCNPP2-201ENST00000441651 455 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 RPL7AP61-201ENST00000443410 636 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL121877.1-201ENST00000453704 622 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 HSPE1P22-201ENST00000456856 327 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 RPS4XP1-201ENST00000482189 787 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 ENPP7P9-201ENST00000514456 627 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC134349.2-201ENST00000535136 910 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL512310.9-201ENST00000553311 948 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL049830.4-201ENST00000555149 351 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC090312.1-201ENST00000580637 348 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 FKBP1AP1-201ENST00000594588 318 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 CASC19-264ENST00000641912 1184 ntBASIC3.79□□□□□ -1.8
HIST1H1AQ02539 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIST1H1AQ02539 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 CR383656.5-201ENST00000547616 1340 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 RNU1-43P-201ENST00000365052 165 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 SNORA70.10-201ENST00000384515 134 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AP000580.1-201ENST00000404439 358 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AL121776.1-201ENST00000429337 372 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 CFL1P1-202ENST00000432948 411 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC069285.2-201ENST00000440210 275 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 TXNP5-201ENST00000441043 315 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 MRPL48P1-201ENST00000445390 636 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC144530.1-201ENST00000452862 555 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 RN7SL174P-201ENST00000475578 289 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 RN7SKP260-201ENST00000516907 149 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms