Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC009974.1-201ENST00000608881 455 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AC084782.3-201ENST00000612282 578 ntBASIC4.26□□□□□ -1.73
LMO4P61968 AC026367.3-201ENST00000619032 590 ntBASIC4.26□□□□□ -1.73
LMO4P61968 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 CASC19-221ENST00000641309 1382 ntBASIC4.26□□□□□ -1.73
LMO4P61968 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO4P61968 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LMO4P61968 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 RNA5SP428-201ENST00000365129 132 ntBASIC4.25□□□□□ -1.73
LMO4P61968 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LMO4P61968 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 GTF2IP5-201ENST00000414608 731 ntBASIC4.25□□□□□ -1.73
LMO4P61968 CHEK2P3-201ENST00000416118 248 ntBASIC4.25□□□□□ -1.73
LMO4P61968 RLIMP2-201ENST00000427891 1563 ntBASIC4.25□□□□□ -1.73
LMO4P61968 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 FABP7P2-201ENST00000429946 379 ntBASIC4.25□□□□□ -1.73
LMO4P61968 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.25□□□□□ -1.73
LMO4P61968 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 HMGN1P5-201ENST00000448591 263 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 AC108161.1-201ENST00000461060 402 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AC092324.1-201ENST00000468671 324 ntBASIC4.25□□□□□ -1.73
LMO4P61968 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 RN7SL591P-201ENST00000496150 292 ntBASIC4.25□□□□□ -1.73
LMO4P61968 PCNAP1-201ENST00000505363 709 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AC096571.1-202ENST00000506634 735 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 EDDM3DP-201ENST00000554692 434 ntBASIC4.25□□□□□ -1.73
LMO4P61968 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.25□□□□□ -1.73
LMO4P61968 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.25□□□□□ -1.73
LMO4P61968 AC104785.1-201ENST00000603220 588 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AC105254.2-201ENST00000603636 436 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AL135786.2-201ENST00000608422 615 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 MIR6748-201ENST00000610433 71 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 AC087385.3-201ENST00000620477 187 ntBASIC4.25□□□□□ -1.73
LMO4P61968 CU459211.1-201ENST00000635667 749 ntBASIC4.25□□□□□ -1.73
LMO4P61968 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.25□□□□□ -1.73
LMO4P61968 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 AC006210.2-201ENST00000367074 1545 ntBASIC4.25□□□□□ -1.73
LMO4P61968 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LMO4P61968 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LMO4P61968 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LMO4P61968 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.24□□□□□ -1.73
LMO4P61968 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LMO4P61968 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LMO4P61968 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms