Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC079097.1-201ENST00000512187 1399 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
RHBDL3P58872 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RHBDL3P58872 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 RN7SKP104-201ENST00000362605 328 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 MIR585-201ENST00000384887 94 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AL590290.1-201ENST00000405336 380 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 RNA5SP296-201ENST00000410523 111 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 LINC01881-201ENST00000416103 412 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 NDUFB4P8-201ENST00000435351 367 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 AL591363.1-201ENST00000450091 483 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.31□□□□□ -1.4
RHBDL3P58872 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.31□□□□□ -1.4
RHBDL3P58872 OR5AZ1P-201ENST00000527448 943 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 AP000676.2-201ENST00000529711 301 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 POLR2KP1-201ENST00000553226 168 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 AL390334.1-201ENST00000556395 450 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AC124283.4-201ENST00000581815 456 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 AP001357.1-201ENST00000586304 1053 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AC123786.2-201ENST00000603459 275 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 AC016542.1-201ENST00000608259 493 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 AC116651.1-201ENST00000609724 556 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AP003400.3-201ENST00000624904 346 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 AC109446.4-201ENST00000623235 2755 ntBASIC6.31□□□□□ -1.4
RHBDL3P58872 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RHBDL3P58872 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RHBDL3P58872 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RHBDL3P58872 AC138907.8-201ENST00000623981 2256 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AL592494.2-201ENST00000425455 1548 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
RHBDL3P58872 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RHBDL3P58872 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 SNURFL-201ENST00000309296 343 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RHBDL3P58872 IGKV7-3-201ENST00000357453 298 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 RNU6-178P-201ENST00000384631 104 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 HSPA8P15-201ENST00000401676 786 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC093422.3-201ENST00000428506 305 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 RBMY2QP-201ENST00000429799 1147 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC005189.1-201ENST00000431286 310 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AL512661.1-201ENST00000434586 1253 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.3□□□□□ -1.4
RHBDL3P58872 MED6P1-201ENST00000439659 713 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 RPL7P40-201ENST00000481703 745 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 COX6B1P2-201ENST00000489624 230 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC004980.4-201ENST00000513375 203 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC133963.2-201ENST00000513686 578 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 RN7SKP147-201ENST00000517154 244 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AC079064.1-201ENST00000528365 362 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AP002812.4-201ENST00000532139 286 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.3□□□□□ -1.4
RHBDL3P58872 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AC025260.1-201ENST00000548858 430 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.3□□□□□ -1.4
RHBDL3P58872 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC027216.1-201ENST00000577726 685 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AL139124.1-201ENST00000609123 421 ntBASIC6.3□□□□□ -1.4
RHBDL3P58872 AC018926.1-201ENST00000616335 435 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms