Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 AC097063.1-201ENST00000426714 1797 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN6P56747 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN6P56747 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 KARSP3-201ENST00000571212 1504 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN6P56747 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLDN6P56747 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN6P56747 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CLDN6P56747 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 AC125336.1-201ENST00000508893 2827 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 SNORA2.3-201ENST00000383920 135 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 RNA5SP241-201ENST00000391326 114 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN6P56747 AC234779.1-201ENST00000425910 285 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN6P56747 AL359265.2-201ENST00000434367 631 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 NPM1P33-201ENST00000438918 872 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN6P56747 AL356981.1-201ENST00000454879 684 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 RN7SKP122-201ENST00000515923 296 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 AC012339.2-201ENST00000523996 453 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN6P56747 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN6P56747 AC008126.1-201ENST00000549019 480 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN6P56747 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN6P56747 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN6P56747 RN7SL290P-201ENST00000578661 300 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 KPNA2P3-201ENST00000584190 848 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 AL109618.2-201ENST00000605527 211 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLDN6P56747 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN6P56747 AC005261.6-201ENST00000623072 1387 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN6P56747 MTCO1P15-201ENST00000529569 1526 ntBASIC4.77□□□□□ -1.65
CLDN6P56747 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLDN6P56747 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDN6P56747 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDN6P56747 AP001284.1-201ENST00000528393 2118 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN6P56747 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDN6P56747 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN6P56747 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN6P56747 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN6P56747 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CLDN6P56747 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN6P56747 RNU2-22P-201ENST00000411266 212 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN6P56747 AC244033.1-201ENST00000426826 870 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN6P56747 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN6P56747 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN6P56747 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 RPL7AP28-201ENST00000464513 571 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN6P56747 RNA5SP230-201ENST00000517039 122 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AP002981.1-201ENST00000517692 975 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN6P56747 AC130364.2-201ENST00000528639 604 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN6P56747 AL110118.1-201ENST00000553543 400 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN6P56747 MIR4660-201ENST00000583549 74 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN6P56747 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN6P56747 AC019193.2-201ENST00000610012 634 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AC006338.2-201ENST00000616864 791 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN6P56747 MFSD8-220ENST00000641243 1422 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN6P56747 MTND5P23-201ENST00000430812 1655 ntBASIC4.76□□□□□ -1.65
CLDN6P56747 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN6P56747 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLDN6P56747 AL137100.1-201ENST00000556703 1620 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN6P56747 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms