Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NPM1P19-201ENST00000450070 712 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 RANP1-206ENST00000455094 651 ntBASIC5.74□□□□□ -1.49
COPB1P53618 RPSAP39-201ENST00000467439 883 ntBASIC5.74□□□□□ -1.49
COPB1P53618 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.74□□□□□ -1.49
COPB1P53618 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.74□□□□□ -1.49
COPB1P53618 AC074087.1-201ENST00000512059 724 ntBASIC5.74□□□□□ -1.49
COPB1P53618 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.74□□□□□ -1.49
COPB1P53618 RNA5SP373-201ENST00000517271 95 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 AC090022.1-201ENST00000546569 311 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.74□□□□□ -1.49
COPB1P53618 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.74□□□□□ -1.49
COPB1P53618 MIR1273E-201ENST00000581165 102 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.74□□□□□ -1.49
COPB1P53618 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.74□□□□□ -1.49
COPB1P53618 AC026741.1-201ENST00000605892 482 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AC012213.4-201ENST00000606457 354 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.74□□□□□ -1.49
COPB1P53618 AC108359.1-201ENST00000616451 1211 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AC068057.2-201ENST00000624047 895 ntBASIC5.74□□□□□ -1.49
COPB1P53618 FRG1DP-201ENST00000635586 771 ntBASIC5.74□□□□□ -1.49
COPB1P53618 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.74□□□□□ -1.49
COPB1P53618 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 MTCO1P7-201ENST00000419523 1542 ntBASIC5.74□□□□□ -1.49
COPB1P53618 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 CDY11P-201ENST00000447168 1651 ntBASIC5.73□□□□□ -1.49
COPB1P53618 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COPB1P53618 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 RNU5E-10P-201ENST00000363506 118 ntBASIC5.73□□□□□ -1.49
COPB1P53618 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COPB1P53618 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 RN7SKP293-201ENST00000411389 296 ntBASIC5.73□□□□□ -1.49
COPB1P53618 BMS1P13-201ENST00000417301 885 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AC104333.2-201ENST00000422630 192 ntBASIC5.73□□□□□ -1.49
COPB1P53618 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.73□□□□□ -1.49
COPB1P53618 AC007563.3-201ENST00000433233 371 ntBASIC5.73□□□□□ -1.49
COPB1P53618 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.73□□□□□ -1.49
COPB1P53618 ELOCP13-201ENST00000443934 329 ntBASIC5.73□□□□□ -1.49
COPB1P53618 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 AC110749.1-201ENST00000462007 357 ntBASIC5.73□□□□□ -1.49
COPB1P53618 SETP6-201ENST00000479329 568 ntBASIC5.73□□□□□ -1.49
COPB1P53618 RN7SL629P-201ENST00000489622 285 ntBASIC5.73□□□□□ -1.49
COPB1P53618 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 RN7SKP265-201ENST00000516448 223 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 IGLV2-28-201ENST00000520681 304 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 MTND2P38-201ENST00000522536 667 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AC021451.1-201ENST00000523498 1129 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.73□□□□□ -1.49
COPB1P53618 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.73□□□□□ -1.49
COPB1P53618 AC015720.2-201ENST00000567709 334 ntBASIC5.73□□□□□ -1.49
COPB1P53618 EIF1P5-201ENST00000585002 234 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AC008507.2-201ENST00000588402 1176 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.73□□□□□ -1.49
COPB1P53618 AC011492.1-201ENST00000600023 315 ntBASIC5.73□□□□□ -1.49
COPB1P53618 MTCO3P22-201ENST00000603219 784 ntBASIC5.73□□□□□ -1.49
COPB1P53618 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 AC097478.2-201ENST00000610572 514 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AC093875.1-201ENST00000623688 504 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AC090617.9-201ENST00000623751 147 ntBASIC5.73□□□□□ -1.49
COPB1P53618 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms