Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDX1P52945 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDX1P52945 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.02□□□□□ -1.61
PDX1P52945 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PDX1P52945 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDX1P52945 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.02□□□□□ -1.61
PDX1P52945 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.02□□□□□ -1.61
PDX1P52945 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 AC125336.1-201ENST00000508893 2827 ntBASIC5.01□□□□□ -1.61
PDX1P52945 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.01□□□□□ -1.61
PDX1P52945 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 NXF4-202ENST00000416098 1465 ntBASIC5.01□□□□□ -1.61
PDX1P52945 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PDX1P52945 RNA5SP455-201ENST00000365190 119 ntBASIC5.01□□□□□ -1.61
PDX1P52945 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.01□□□□□ -1.61
PDX1P52945 AC079809.1-201ENST00000415468 276 ntBASIC5.01□□□□□ -1.61
PDX1P52945 DPPA2P2-201ENST00000418220 897 ntBASIC5.01□□□□□ -1.61
PDX1P52945 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.01□□□□□ -1.61
PDX1P52945 USP9YP9-201ENST00000429406 715 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC023141.6-201ENST00000429418 337 ntBASIC5.01□□□□□ -1.61
PDX1P52945 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.01□□□□□ -1.61
PDX1P52945 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.01□□□□□ -1.61
PDX1P52945 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.01□□□□□ -1.61
PDX1P52945 RPL34P20-201ENST00000442771 351 ntBASIC5.01□□□□□ -1.61
PDX1P52945 RPL7P16-201ENST00000479738 738 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC098583.1-201ENST00000480875 255 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.01□□□□□ -1.61
PDX1P52945 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.01□□□□□ -1.61
PDX1P52945 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.01□□□□□ -1.61
PDX1P52945 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.01□□□□□ -1.61
PDX1P52945 AP003049.1-201ENST00000529418 457 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.01□□□□□ -1.61
PDX1P52945 BNIP3P1-201ENST00000547295 580 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.01□□□□□ -1.61
PDX1P52945 AC079075.1-201ENST00000559543 878 ntBASIC5.01□□□□□ -1.61
PDX1P52945 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.01□□□□□ -1.61
PDX1P52945 RN7SL290P-201ENST00000578661 300 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.01□□□□□ -1.61
PDX1P52945 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.01□□□□□ -1.61
PDX1P52945 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.01□□□□□ -1.61
PDX1P52945 LSM1P2-201ENST00000604911 322 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 AL356608.1-201ENST00000610034 820 ntBASIC5.01□□□□□ -1.61
PDX1P52945 EIF3FP1-201ENST00000613970 806 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC025016.1-201ENST00000616746 682 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC080188.3-201ENST00000624842 748 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC097372.4-201ENST00000625025 466 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC099654.6-201ENST00000636487 512 ntBASIC5.01□□□□□ -1.61
PDX1P52945 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.01□□□□□ -1.61
PDX1P52945 MTND5P23-201ENST00000430812 1655 ntBASIC5.01□□□□□ -1.61
PDX1P52945 AC245100.2-201ENST00000454544 1679 ntBASIC5.01□□□□□ -1.61
PDX1P52945 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.01□□□□□ -1.61
PDX1P52945 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 AC009501.3-201ENST00000605001 1352 ntBASIC5.01□□□□□ -1.61
PDX1P52945 IRF5P1-201ENST00000504852 2164 ntBASIC5.01□□□□□ -1.61
PDX1P52945 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDX1P52945 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 MFSD8-216ENST00000641147 4009 ntBASIC5□□□□□ -1.61
PDX1P52945 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDX1P52945 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 SNORA5.1-201ENST00000384275 131 ntBASIC5□□□□□ -1.61
PDX1P52945 RNA5SP241-201ENST00000391326 114 ntBASIC5□□□□□ -1.61
PDX1P52945 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 MGAT2P2-201ENST00000427194 797 ntBASIC5□□□□□ -1.61
PDX1P52945 VTI1BP4-201ENST00000427516 527 ntBASIC5□□□□□ -1.61
PDX1P52945 RPL7AP49-201ENST00000429522 581 ntBASIC5□□□□□ -1.61
PDX1P52945 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 AL591438.1-201ENST00000433508 581 ntBASIC5□□□□□ -1.61
PDX1P52945 RPL5P25-201ENST00000441148 775 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms