Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.38□□□□□ -1.55
SSR1P43307 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.38□□□□□ -1.55
SSR1P43307 AL139286.1-201ENST00000604465 483 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AC108359.1-201ENST00000616451 1211 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AP006248.2-201ENST00000623309 592 ntBASIC5.38□□□□□ -1.55
SSR1P43307 AP002505.2-201ENST00000623585 696 ntBASIC5.38□□□□□ -1.55
SSR1P43307 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.38□□□□□ -1.55
SSR1P43307 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SSR1P43307 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SSR1P43307 KPNA2P2-201ENST00000419546 1489 ntBASIC5.38□□□□□ -1.55
SSR1P43307 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SSR1P43307 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSR1P43307 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
SSR1P43307 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSR1P43307 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.37□□□□□ -1.55
SSR1P43307 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSR1P43307 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSR1P43307 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SSR1P43307 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.37□□□□□ -1.55
SSR1P43307 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SSR1P43307 RNA5SP132-201ENST00000364725 118 ntBASIC5.37□□□□□ -1.55
SSR1P43307 RNU1-43P-201ENST00000365052 165 ntBASIC5.37□□□□□ -1.55
SSR1P43307 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSR1P43307 AL121776.1-201ENST00000429337 372 ntBASIC5.37□□□□□ -1.55
SSR1P43307 CFL1P1-202ENST00000432948 411 ntBASIC5.37□□□□□ -1.55
SSR1P43307 RPL12P46-201ENST00000436610 195 ntBASIC5.37□□□□□ -1.55
SSR1P43307 AC004980.3-201ENST00000447046 365 ntBASIC5.37□□□□□ -1.55
SSR1P43307 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.37□□□□□ -1.55
SSR1P43307 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.37□□□□□ -1.55
SSR1P43307 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SSR1P43307 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.37□□□□□ -1.55
SSR1P43307 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.37□□□□□ -1.55
SSR1P43307 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.37□□□□□ -1.55
SSR1P43307 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.37□□□□□ -1.55
SSR1P43307 RPL26P30-202ENST00000602923 645 ntBASIC5.37□□□□□ -1.55
SSR1P43307 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.37□□□□□ -1.55
SSR1P43307 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.37□□□□□ -1.55
SSR1P43307 AP000648.2-201ENST00000624182 404 ntBASIC5.37□□□□□ -1.55
SSR1P43307 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.37□□□□□ -1.55
SSR1P43307 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.37□□□□□ -1.55
SSR1P43307 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
SSR1P43307 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSR1P43307 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSR1P43307 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SSR1P43307 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSR1P43307 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSR1P43307 MAPK10-303ENST00000641324 3959 ntBASIC5.37□□□□□ -1.55
SSR1P43307 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSR1P43307 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 GCNT6-201ENST00000379591 934 ntBASIC5.36□□□□□ -1.55
SSR1P43307 RNU6-1279P-201ENST00000383917 103 ntBASIC5.36□□□□□ -1.55
SSR1P43307 SNORA2.3-201ENST00000383920 135 ntBASIC5.36□□□□□ -1.55
SSR1P43307 RPL10P10-201ENST00000403509 664 ntBASIC5.36□□□□□ -1.55
SSR1P43307 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.36□□□□□ -1.55
SSR1P43307 U3.32-201ENST00000408116 212 ntBASIC5.36□□□□□ -1.55
SSR1P43307 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
SSR1P43307 EI24P4-201ENST00000423683 1078 ntBASIC5.36□□□□□ -1.55
SSR1P43307 AC108075.1-201ENST00000424692 529 ntBASIC5.36□□□□□ -1.55
SSR1P43307 RPS4XP16-201ENST00000427198 791 ntBASIC5.36□□□□□ -1.55
SSR1P43307 COX6CP13-201ENST00000428703 226 ntBASIC5.36□□□□□ -1.55
SSR1P43307 AL391987.1-201ENST00000441025 200 ntBASIC5.36□□□□□ -1.55
SSR1P43307 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.36□□□□□ -1.55
SSR1P43307 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.36□□□□□ -1.55
SSR1P43307 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSR1P43307 AC009127.1-201ENST00000467090 155 ntBASIC5.36□□□□□ -1.55
SSR1P43307 RPL7P6-201ENST00000480903 738 ntBASIC5.36□□□□□ -1.55
SSR1P43307 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.36□□□□□ -1.55
SSR1P43307 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.36□□□□□ -1.55
SSR1P43307 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSR1P43307 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.36□□□□□ -1.55
SSR1P43307 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 AC017076.1-201ENST00000607613 578 ntBASIC5.36□□□□□ -1.55
SSR1P43307 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSR1P43307 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSR1P43307 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.36□□□□□ -1.55
SSR1P43307 AL672167.1-204ENST00000641875 3017 ntBASIC5.36□□□□□ -1.55
SSR1P43307 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSR1P43307 AC107068.1-201ENST00000563286 4218 ntBASIC5.36□□□□□ -1.55
SSR1P43307 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSR1P43307 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SSR1P43307 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSR1P43307 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.35□□□□□ -1.55
SSR1P43307 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSR1P43307 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
SSR1P43307 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms