Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHMT2P34897 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SHMT2P34897 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.81□□□□□ -1.64
SHMT2P34897 MIR550A3-201ENST00000390735 95 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.81□□□□□ -1.64
SHMT2P34897 COX6B1P1-201ENST00000415962 213 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHMT2P34897 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
SHMT2P34897 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 RPL7P11-201ENST00000437586 658 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.81□□□□□ -1.64
SHMT2P34897 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 AC073648.4-201ENST00000442655 781 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AC002553.2-201ENST00000453217 340 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AL691482.1-201ENST00000453255 87 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 TRBV8-1-201ENST00000481590 279 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.81□□□□□ -1.64
SHMT2P34897 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.81□□□□□ -1.64
SHMT2P34897 OR5D15P-201ENST00000531671 942 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AC008033.2-201ENST00000542626 177 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.81□□□□□ -1.64
SHMT2P34897 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.81□□□□□ -1.64
SHMT2P34897 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.81□□□□□ -1.64
SHMT2P34897 AL451049.1-201ENST00000608672 497 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AC096586.2-201ENST00000610260 441 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 AL049794.2-201ENST00000616301 365 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 MIR6730-201ENST00000622213 67 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.81□□□□□ -1.64
SHMT2P34897 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SHMT2P34897 AP000542.2-201ENST00000623199 6179 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.81□□□□□ -1.64
SHMT2P34897 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHMT2P34897 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHMT2P34897 MAPK10-349ENST00000641767 3661 ntBASIC4.81□□□□□ -1.64
SHMT2P34897 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 AC099654.2-201ENST00000433031 1980 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 SNORA51.8-201ENST00000384234 132 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 AL133270.1-201ENST00000402635 279 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.8□□□□□ -1.64
SHMT2P34897 AC013429.2-201ENST00000418798 781 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 OR6C64P-201ENST00000419708 825 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 OR2AM1P-201ENST00000422137 422 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 TRGV7-201ENST00000427089 353 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 AC112498.1-201ENST00000444401 332 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 AL589765.3-201ENST00000446084 462 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 AC116562.1-201ENST00000485355 781 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.8□□□□□ -1.64
SHMT2P34897 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.8□□□□□ -1.64
SHMT2P34897 AC116553.2-201ENST00000564203 463 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 AL390726.5-202ENST00000564800 256 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 OR1F2P-201ENST00000570470 933 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 AL713998.2-201ENST00000604538 1198 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 AC087783.2-201ENST00000605070 562 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 AP005212.4-201ENST00000614206 710 ntBASIC4.8□□□□□ -1.64
SHMT2P34897 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.8□□□□□ -1.64
SHMT2P34897 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.8□□□□□ -1.64
SHMT2P34897 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHMT2P34897 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
SHMT2P34897 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHMT2P34897 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHMT2P34897 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.79□□□□□ -1.64
SHMT2P34897 NAMPTP1-201ENST00000440465 2514 ntBASIC4.79□□□□□ -1.64
SHMT2P34897 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHMT2P34897 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
SHMT2P34897 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHMT2P34897 AC021242.1-201ENST00000507315 2035 ntBASIC4.79□□□□□ -1.64
SHMT2P34897 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.79□□□□□ -1.64
SHMT2P34897 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHMT2P34897 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHMT2P34897 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHMT2P34897 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.79□□□□□ -1.64
SHMT2P34897 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
SHMT2P34897 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms