Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CIITAP33076 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.79□□□□□ -1.48
CIITAP33076 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.79□□□□□ -1.48
CIITAP33076 AC004980.4-201ENST00000513375 203 ntBASIC5.79□□□□□ -1.48
CIITAP33076 AC112198.4-201ENST00000515450 351 ntBASIC5.79□□□□□ -1.48
CIITAP33076 RNU6-491P-201ENST00000516099 110 ntBASIC5.79□□□□□ -1.48
CIITAP33076 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.79□□□□□ -1.48
CIITAP33076 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CIITAP33076 AC074029.2-201ENST00000551045 634 ntBASIC5.79□□□□□ -1.48
CIITAP33076 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.79□□□□□ -1.48
CIITAP33076 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CIITAP33076 AC015922.4-201ENST00000612568 690 ntBASIC5.79□□□□□ -1.48
CIITAP33076 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.79□□□□□ -1.48
CIITAP33076 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CIITAP33076 AL356317.1-201ENST00000396110 1436 ntBASIC5.79□□□□□ -1.48
CIITAP33076 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.79□□□□□ -1.48
CIITAP33076 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CIITAP33076 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.79□□□□□ -1.48
CIITAP33076 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CIITAP33076 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CIITAP33076 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.79□□□□□ -1.48
CIITAP33076 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CIITAP33076 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.78□□□□□ -1.48
CIITAP33076 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CIITAP33076 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 AC097063.1-201ENST00000426714 1797 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CIITAP33076 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.78□□□□□ -1.48
CIITAP33076 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 OR4K17-201ENST00000315543 1032 ntBASIC5.78□□□□□ -1.48
CIITAP33076 RN7SKP113-201ENST00000363891 295 ntBASIC5.78□□□□□ -1.48
CIITAP33076 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CIITAP33076 SNORA2.3-201ENST00000383920 135 ntBASIC5.78□□□□□ -1.48
CIITAP33076 MIR137-201ENST00000385223 102 ntBASIC5.78□□□□□ -1.48
CIITAP33076 RNA5SP105-201ENST00000391123 113 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AL356057.1-202ENST00000402263 756 ntBASIC5.78□□□□□ -1.48
CIITAP33076 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CIITAP33076 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.78□□□□□ -1.48
CIITAP33076 RHOT1P3-201ENST00000436571 331 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AL645638.1-201ENST00000440519 361 ntBASIC5.78□□□□□ -1.48
CIITAP33076 ARAFP2-201ENST00000440565 559 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 CEACAMP7-201ENST00000444105 496 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 PRPF38AP1-201ENST00000451976 933 ntBASIC5.78□□□□□ -1.48
CIITAP33076 RN7SL443P-201ENST00000464331 290 ntBASIC5.78□□□□□ -1.48
CIITAP33076 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 AC008410.1-201ENST00000483777 339 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AC005412.2-201ENST00000492004 341 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 RN7SKP260-201ENST00000516907 149 ntBASIC5.78□□□□□ -1.48
CIITAP33076 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 OR8X1P-201ENST00000534542 869 ntBASIC5.78□□□□□ -1.48
CIITAP33076 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.78□□□□□ -1.48
CIITAP33076 AC051619.2-201ENST00000559063 397 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.78□□□□□ -1.48
CIITAP33076 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 AC133794.1-201ENST00000602731 914 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AC002069.2-201ENST00000603580 883 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AC135178.6-201ENST00000605314 398 ntBASIC5.78□□□□□ -1.48
CIITAP33076 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.78□□□□□ -1.48
CIITAP33076 AC022960.3-201ENST00000619794 441 ntBASIC5.78□□□□□ -1.48
CIITAP33076 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.78□□□□□ -1.48
CIITAP33076 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CIITAP33076 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.78□□□□□ -1.48
CIITAP33076 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.78□□□□□ -1.48
CIITAP33076 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CIITAP33076 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 AC005005.4-201ENST00000623789 16698 ntBASIC5.77□□□□□ -1.49
CIITAP33076 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CIITAP33076 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.77□□□□□ -1.49
CIITAP33076 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.77□□□□□ -1.49
CIITAP33076 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 SNORA58B-201ENST00000364259 136 ntBASIC5.77□□□□□ -1.49
CIITAP33076 RNU4-4P-201ENST00000364588 130 ntBASIC5.77□□□□□ -1.49
CIITAP33076 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.77□□□□□ -1.49
CIITAP33076 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CIITAP33076 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC079809.1-201ENST00000415468 276 ntBASIC5.77□□□□□ -1.49
CIITAP33076 HYALP1-201ENST00000417674 1279 ntBASIC5.77□□□□□ -1.49
CIITAP33076 AC093162.1-201ENST00000419682 124 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms