Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A5P29400 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
COL4A5P29400 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL4A5P29400 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL4A5P29400 MIR383-201ENST00000362257 73 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 RNU1-132P-201ENST00000364300 164 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL4A5P29400 AC009237.10-201ENST00000414112 510 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 AC009237.5-201ENST00000414271 501 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.56□□□□□ -1.52
COL4A5P29400 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A5P29400 HSFY6P-201ENST00000445573 403 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A5P29400 AC010547.7-201ENST00000570323 333 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 MIR3158-1-201ENST00000583596 81 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A5P29400 AC034229.5-201ENST00000624258 185 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 AC006453.5-201ENST00000636451 619 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 OR2L1P-202ENST00000641567 1023 ntBASIC5.56□□□□□ -1.52
COL4A5P29400 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
COL4A5P29400 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A5P29400 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A5P29400 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A5P29400 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A5P29400 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A5P29400 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A5P29400 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL4A5P29400 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A5P29400 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A5P29400 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A5P29400 YY1P1-201ENST00000427625 668 ntBASIC5.55□□□□□ -1.52
COL4A5P29400 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.55□□□□□ -1.52
COL4A5P29400 AP002812.1-201ENST00000495378 474 ntBASIC5.55□□□□□ -1.52
COL4A5P29400 AP000827.1-201ENST00000527814 258 ntBASIC5.55□□□□□ -1.52
COL4A5P29400 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
COL4A5P29400 MIR3653-201ENST00000625572 110 ntBASIC5.55□□□□□ -1.52
COL4A5P29400 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A5P29400 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL4A5P29400 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.55□□□□□ -1.52
COL4A5P29400 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.55□□□□□ -1.52
COL4A5P29400 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL4A5P29400 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL4A5P29400 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 RNA5SP283-201ENST00000365604 119 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 TMBIM7P-201ENST00000418074 855 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 E2F6P2-201ENST00000420708 748 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A5P29400 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A5P29400 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A5P29400 AC090142.1-201ENST00000465776 462 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 AC011815.3-201ENST00000624194 473 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A5P29400 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 AC005261.4-201ENST00000600047 1385 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A5P29400 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COL4A5P29400 AL021877.2-201ENST00000624442 10684 ntBASIC5.54□□□□□ -1.52
COL4A5P29400 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A5P29400 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A5P29400 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL4A5P29400 AL161909.1-201ENST00000397390 712 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 AL356095.1-201ENST00000417217 199 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 RCC2P2-201ENST00000422174 918 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 RGS17P1-201ENST00000423358 553 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 AC006946.1-201ENST00000429106 328 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 AC092162.1-201ENST00000432828 434 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 NPM1P18-201ENST00000434232 732 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 RN7SL691P-201ENST00000494487 301 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 MIR2116-201ENST00000517221 80 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 AC005868.1-201ENST00000536421 331 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 OR8R1P-201ENST00000543943 764 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A5P29400 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 AC009120.7-201ENST00000623452 780 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms