Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC092490.3-201ENST00000545370 572 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AL049830.4-201ENST00000555149 351 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC068870.2-201ENST00000620635 389 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AP002799.1-201ENST00000623552 423 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 MAPK10-349ENST00000641767 3661 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 CASC19-204ENST00000641001 2055 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 MTND5P23-201ENST00000430812 1655 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC112255.1-201ENST00000624070 2493 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 RNA5SP305-201ENST00000362665 119 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 RNU1-106P-201ENST00000384382 164 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AL645733.1-201ENST00000402250 217 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 SNORA79B-201ENST00000410557 148 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AL356968.2-201ENST00000412769 1257 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC013268.2-201ENST00000420753 337 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 RPS29P9-201ENST00000440360 171 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 SNRPFP2-201ENST00000440710 251 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC092647.3-201ENST00000443044 633 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 RN7SL826P-201ENST00000479724 288 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC113430.1-201ENST00000506872 718 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 ENPP7P9-201ENST00000514456 627 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 RFPL4AP3-201ENST00000515267 345 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 OR4A46P-201ENST00000527255 933 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 EIF1P5-201ENST00000585002 234 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC124856.1-201ENST00000600819 896 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC105254.2-201ENST00000603636 436 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC099494.2-201ENST00000623371 978 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DMBP28068 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DMBP28068 AC107068.1-201ENST00000563286 4218 ntBASIC3.75□□□□□ -1.81
HLA-DMBP28068 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMBP28068 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 ATP5HP3-201ENST00000396994 486 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 PTP4A1P1-201ENST00000420539 515 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 RPL12P3-201ENST00000440080 396 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 RN7SL97P-201ENST00000486780 299 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms