Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.55□□□□□ -1.52
RB1P06400 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 AC019072.1-201ENST00000604535 1551 ntBASIC5.55□□□□□ -1.52
RB1P06400 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RB1P06400 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RB1P06400 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.54□□□□□ -1.52
RB1P06400 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.54□□□□□ -1.52
RB1P06400 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 AC004158.1-201ENST00000564508 4319 ntBASIC5.54□□□□□ -1.52
RB1P06400 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.54□□□□□ -1.52
RB1P06400 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.54□□□□□ -1.52
RB1P06400 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 AC133552.1-201ENST00000569988 4007 ntBASIC5.54□□□□□ -1.52
RB1P06400 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.54□□□□□ -1.52
RB1P06400 SNORD115-48-201ENST00000364764 76 ntBASIC5.54□□□□□ -1.52
RB1P06400 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
RB1P06400 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 AC073464.3-201ENST00000422564 712 ntBASIC5.54□□□□□ -1.52
RB1P06400 MTND4P24-201ENST00000424002 397 ntBASIC5.54□□□□□ -1.52
RB1P06400 RPL5P2-201ENST00000429598 854 ntBASIC5.54□□□□□ -1.52
RB1P06400 RHOT1P3-201ENST00000436571 331 ntBASIC5.54□□□□□ -1.52
RB1P06400 XKRY2-201ENST00000442362 1093 ntBASIC5.54□□□□□ -1.52
RB1P06400 LINC02210-201ENST00000444561 288 ntBASIC5.54□□□□□ -1.52
RB1P06400 AC073264.2-201ENST00000448886 166 ntBASIC5.54□□□□□ -1.52
RB1P06400 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.54□□□□□ -1.52
RB1P06400 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.54□□□□□ -1.52
RB1P06400 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 AC097486.1-201ENST00000515331 210 ntBASIC5.54□□□□□ -1.52
RB1P06400 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 HMGB1P46-201ENST00000520062 610 ntBASIC5.54□□□□□ -1.52
RB1P06400 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.54□□□□□ -1.52
RB1P06400 C1GALT1P3-201ENST00000522049 819 ntBASIC5.54□□□□□ -1.52
RB1P06400 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.54□□□□□ -1.52
RB1P06400 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.54□□□□□ -1.52
RB1P06400 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RB1P06400 AC091042.1-201ENST00000579213 173 ntBASIC5.54□□□□□ -1.52
RB1P06400 AC002069.2-201ENST00000603580 883 ntBASIC5.54□□□□□ -1.52
RB1P06400 MEMO1P5-201ENST00000604810 406 ntBASIC5.54□□□□□ -1.52
RB1P06400 AC135803.1-201ENST00000608748 565 ntBASIC5.54□□□□□ -1.52
RB1P06400 AC015712.7-201ENST00000615211 635 ntBASIC5.54□□□□□ -1.52
RB1P06400 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.54□□□□□ -1.52
RB1P06400 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RB1P06400 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.54□□□□□ -1.52
RB1P06400 AC009501.3-201ENST00000605001 1352 ntBASIC5.54□□□□□ -1.52
RB1P06400 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
RB1P06400 AL360270.2-201ENST00000562952 5985 ntBASIC5.54□□□□□ -1.52
RB1P06400 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RB1P06400 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RB1P06400 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
RB1P06400 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RB1P06400 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 SCARNA15-201ENST00000607520 4325 ntBASIC5.53□□□□□ -1.52
RB1P06400 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RB1P06400 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RB1P06400 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RB1P06400 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RB1P06400 AC006065.1-201ENST00000422539 802 ntBASIC5.53□□□□□ -1.52
RB1P06400 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 AC068287.1-201ENST00000430283 295 ntBASIC5.53□□□□□ -1.52
RB1P06400 AC016712.1-201ENST00000431088 378 ntBASIC5.53□□□□□ -1.52
RB1P06400 AL590762.3-201ENST00000436372 640 ntBASIC5.53□□□□□ -1.52
RB1P06400 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RB1P06400 OR52J1P-201ENST00000450596 932 ntBASIC5.53□□□□□ -1.52
RB1P06400 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.53□□□□□ -1.52
RB1P06400 GAPDHP56-201ENST00000506031 988 ntBASIC5.53□□□□□ -1.52
RB1P06400 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.53□□□□□ -1.52
RB1P06400 HPRT1P1-201ENST00000509498 657 ntBASIC5.53□□□□□ -1.52
RB1P06400 AC006427.1-201ENST00000514359 712 ntBASIC5.53□□□□□ -1.52
RB1P06400 RNU6-467P-201ENST00000517027 110 ntBASIC5.53□□□□□ -1.52
RB1P06400 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.53□□□□□ -1.52
RB1P06400 IGKV2D-10-201ENST00000520194 281 ntBASIC5.53□□□□□ -1.52
RB1P06400 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.53□□□□□ -1.52
RB1P06400 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.53□□□□□ -1.52
RB1P06400 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.53□□□□□ -1.52
RB1P06400 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.53□□□□□ -1.52
RB1P06400 AC084824.2-201ENST00000548906 345 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms