Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC067959.1-201ENST00000604334 379 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 AL121890.2-201ENST00000617644 465 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AL133370.2-201ENST00000619934 439 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFBP01127 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFBP01127 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFBP01127 CCT8P1-201ENST00000413611 1657 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AC140134.1-201ENST00000511830 3544 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDGFBP01127 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 AC007342.9-201ENST00000623877 1385 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 DHX40P1-201ENST00000588725 1412 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 AC007342.7-201ENST00000624610 2337 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 STX3-208ENST00000641815 3236 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 UGT2B26P-201ENST00000508672 1613 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AL137100.1-201ENST00000556703 1620 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDGFBP01127 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 AL359837.1-201ENST00000381357 287 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC013470.3-201ENST00000420252 1194 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AL389915.1-201ENST00000422463 466 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC006065.1-201ENST00000422539 802 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFBP01127 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFBP01127 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFBP01127 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFBP01127 TXNP2-201ENST00000443918 295 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC010733.1-201ENST00000451515 401 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDGFBP01127 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 RPS17P5-201ENST00000498293 408 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 PPM1AP1-201ENST00000502740 1135 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.17□□□□□ -1.58
PDGFBP01127 ATG10-AS1-201ENST00000504846 648 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFBP01127 RNA5SP464-201ENST00000516251 108 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 RNU6-551P-201ENST00000516661 103 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFBP01127 OR5M2P-201ENST00000529003 936 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PDGFBP01127 AC023575.1-201ENST00000580510 358 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 RN7SL690P-201ENST00000582087 240 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFBP01127 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.17□□□□□ -1.58
PDGFBP01127 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 SNX6P1-201ENST00000601728 1224 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC008814.1-201ENST00000603797 406 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AP005131.7-201ENST00000610087 611 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFBP01127 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 AP001005.3-201ENST00000622049 129 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 AC008785.1-201ENST00000624475 456 ntBASIC5.17□□□□□ -1.58
PDGFBP01127 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFBP01127 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFBP01127 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFBP01127 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
PDGFBP01127 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDGFBP01127 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 SNORD56.6-201ENST00000384569 71 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 OR8V1P-201ENST00000395193 873 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 PEX12P1-201ENST00000400284 1048 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFBP01127 RPS26P38-201ENST00000414476 348 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 YY1P1-201ENST00000427625 668 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFBP01127 BX323845.1-201ENST00000432417 179 ntBASIC5.16□□□□□ -1.58
PDGFBP01127 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFBP01127 ARL2BPP10-201ENST00000446487 531 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms