Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC104306.1-201ENST00000449702 371 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHOX2O60902 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.87□□□□□ -1.63
SHOX2O60902 PPM1AP1-201ENST00000502740 1135 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.87□□□□□ -1.63
SHOX2O60902 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.87□□□□□ -1.63
SHOX2O60902 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.87□□□□□ -1.63
SHOX2O60902 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.87□□□□□ -1.63
SHOX2O60902 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.87□□□□□ -1.63
SHOX2O60902 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.87□□□□□ -1.63
SHOX2O60902 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.87□□□□□ -1.63
SHOX2O60902 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 OR1AB1P-201ENST00000585564 761 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.87□□□□□ -1.63
SHOX2O60902 AC011487.3-201ENST00000593607 453 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 AC020634.1-201ENST00000608701 549 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 AC000068.2-201ENST00000608816 460 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 AL049794.2-201ENST00000616301 365 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHOX2O60902 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHOX2O60902 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.87□□□□□ -1.63
SHOX2O60902 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHOX2O60902 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 MAPK10-320ENST00000641462 6696 ntBASIC4.87□□□□□ -1.63
SHOX2O60902 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHOX2O60902 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHOX2O60902 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHOX2O60902 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHOX2O60902 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHOX2O60902 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.86□□□□□ -1.63
SHOX2O60902 EEF1B2P8-201ENST00000414101 671 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 RPL34P3-201ENST00000421454 338 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.86□□□□□ -1.63
SHOX2O60902 AC007394.1-201ENST00000421941 531 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHOX2O60902 TNPO1P1-201ENST00000423641 1138 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 GEMIN8P3-201ENST00000445417 720 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.86□□□□□ -1.63
SHOX2O60902 AC007998.1-201ENST00000474156 672 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 AC012158.1-204ENST00000483430 465 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 AC008897.1-201ENST00000494006 347 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 AK4P6-201ENST00000505168 528 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.86□□□□□ -1.63
SHOX2O60902 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.86□□□□□ -1.63
SHOX2O60902 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.86□□□□□ -1.63
SHOX2O60902 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHOX2O60902 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.86□□□□□ -1.63
SHOX2O60902 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.86□□□□□ -1.63
SHOX2O60902 AC100767.2-201ENST00000604840 693 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.86□□□□□ -1.63
SHOX2O60902 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHOX2O60902 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SHOX2O60902 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHOX2O60902 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
SHOX2O60902 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.86□□□□□ -1.63
SHOX2O60902 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SHOX2O60902 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SHOX2O60902 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 AC026951.1-201ENST00000559530 2459 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.85□□□□□ -1.63
SHOX2O60902 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 SNORD74.4-201ENST00000364129 80 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SHOX2O60902 AC004552.1-201ENST00000419089 348 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 DSTNP5-201ENST00000427921 523 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.85□□□□□ -1.63
SHOX2O60902 AL627308.1-201ENST00000435693 821 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 RPL23AP19-201ENST00000436229 369 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 AL163193.1-201ENST00000444895 788 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 AL161636.2-201ENST00000445179 927 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 RANP1-206ENST00000455094 651 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 RPS26P3-201ENST00000470205 348 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 AC090543.2-201ENST00000483963 348 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 AC004057.1-201ENST00000485827 348 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 AC015795.1-201ENST00000513669 327 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.85□□□□□ -1.63
SHOX2O60902 SNORD46.2-201ENST00000516021 102 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 CDH12P4-201ENST00000517835 295 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 CDH12P3-201ENST00000517935 295 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 CDH12P1-201ENST00000518435 295 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.85□□□□□ -1.63
SHOX2O60902 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SHOX2O60902 FKBP1BP1-201ENST00000553366 325 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.85□□□□□ -1.63
SHOX2O60902 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.85□□□□□ -1.63
SHOX2O60902 CR383656.5-201ENST00000547616 1340 ntBASIC4.85□□□□□ -1.63
SHOX2O60902 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHOX2O60902 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms