Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL139407.1-201ENST00000613826 1175 ntBASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 AL355974.3-201ENST00000617383 467 ntBASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 AL035461.2-201ENST00000619201 524 ntBASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 AC024023.1-201ENST00000624530 922 ntBASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 MTCO1P18-201ENST00000455518 1419 ntBASIC5.39□□□□□ -1.55
CCDC187A0A096LP49 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 VPS35P1-201ENST00000563400 1518 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 ZNF733P-202ENST00000444809 1573 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 U6.112-201ENST00000384129 70 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AP002530.1-201ENST00000405705 684 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 HIGD1AP15-201ENST00000416198 280 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC009506.2-201ENST00000420635 840 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC096775.1-201ENST00000437724 448 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 YWHAZP2-201ENST00000440317 728 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC092647.3-201ENST00000443044 633 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC097499.1-201ENST00000444277 208 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC092685.1-201ENST00000447960 1243 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 FAR2P1-206ENST00000449736 709 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 ART2BP-201ENST00000453501 499 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 GTF2IP12-201ENST00000456547 356 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 RPS4XP6-201ENST00000477670 797 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 RN7SL447P-201ENST00000494711 245 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 OR10V3P-201ENST00000525712 725 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 DUXAP5-201ENST00000529668 529 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC022832.1-201ENST00000530718 645 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 HSPE1P2-201ENST00000554777 306 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC122108.2-201ENST00000611946 526 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC004232.3-201ENST00000622977 525 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC104985.3-201ENST00000623479 597 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AC017007.4-201ENST00000503353 1352 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 AL138820.1-201ENST00000617901 5305 ntBASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC187A0A096LP49 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 MIR551A-201ENST00000385042 96 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 AC233289.1-201ENST00000403700 508 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 LINC01347-201ENST00000417964 355 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 AC015977.1-201ENST00000418887 292 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 MTND2P16-201ENST00000419987 799 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 AL133325.1-201ENST00000421090 382 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 FO393419.3-201ENST00000428741 282 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 MTCO2P20-201ENST00000437339 673 ntBASIC5.37□□□□□ -1.55
CCDC187A0A096LP49 RPL12P3-201ENST00000440080 396 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms