Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AL133481.2-203ENST00000607558 139 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC211433.2-201ENST00000608433 387 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC009237.15-201ENST00000610252 501 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AL352984.2-202ENST00000613699 155 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-368P-201ENST00000620928 107 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-538P-201ENST00000622329 107 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AL121594.5-201ENST00000631724 573 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 PARP4P2-201ENST00000446672 3326 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC239868.2-201ENST00000564237 4527 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC111188.2-201ENST00000529697 1387 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 SAMMSON-210ENST00000641260 1308 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AP002512.4-202ENST00000641599 4530 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 DEFA9P-201ENST00000433042 285 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 FTH1P16-201ENST00000435241 552 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 NANOGP2-201ENST00000435391 727 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 CACYBPP1-201ENST00000438592 684 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 snoU13.29-201ENST00000459370 104 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 MTND2P14-201ENST00000482139 351 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PDCL3P4-201ENST00000489621 720 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC092593.2-201ENST00000513866 913 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC091078.2-201ENST00000557145 559 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC069366.1-201ENST00000583159 838 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 FAM27E4-201ENST00000605259 342 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 NANOGP3-201ENST00000605855 286 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AL138960.1-201ENST00000613838 513 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC145207.9-201ENST00000623802 325 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AL442128.2-201ENST00000620246 1824 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AL034546.1-201ENST00000623740 3693 ntBASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
PCDHB1Q9Y5F3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-353P-201ENST00000364266 108 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 RNA5SP132-201ENST00000364725 118 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 OR7E101P-201ENST00000400428 513 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 TAF13P2-201ENST00000416876 286 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 RPL34P3-201ENST00000421454 338 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 OR5M12P-201ENST00000423388 929 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms