Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL162431.4-201ENST00000604674 411 ntBASIC4.8□□□□□ -1.64
RNF6Q9Y252 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF6Q9Y252 AC100827.5-201ENST00000615883 426 ntBASIC4.8□□□□□ -1.64
RNF6Q9Y252 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF6Q9Y252 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RNF6Q9Y252 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF6Q9Y252 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF6Q9Y252 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF6Q9Y252 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
RNF6Q9Y252 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 SNORA17.1-201ENST00000362945 126 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 MT-RNR1-201ENST00000389680 954 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 OR4K12P-201ENST00000406538 961 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 XKRYP6-201ENST00000440468 1116 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 XKRYP3-201ENST00000442113 1116 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AL031584.1-201ENST00000447169 754 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 RPL31P20-201ENST00000449593 360 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 AC107015.1-201ENST00000466902 747 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 RPL7P6-201ENST00000480903 738 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AC110775.1-201ENST00000513721 462 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AP001922.4-201ENST00000526967 290 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 AL390334.1-201ENST00000556395 450 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 AC005341.1-201ENST00000571086 708 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 AC090527.3-201ENST00000619041 548 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.79□□□□□ -1.64
RNF6Q9Y252 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RNF6Q9Y252 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF6Q9Y252 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 CASC19-281ENST00000642118 1554 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 U3.32-201ENST00000408116 212 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 RN7SKP126-201ENST00000411143 300 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 RPS26P13-201ENST00000419030 330 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC007064.3-201ENST00000422608 359 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 PA2G4P6-201ENST00000438325 1197 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC006466.1-201ENST00000438721 289 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC092647.3-201ENST00000443044 633 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 RPL7AP61-201ENST00000443410 636 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 Z80107.2-201ENST00000445127 392 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 GAPDHP25-201ENST00000447061 1001 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 MRPL35P2-201ENST00000448009 511 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 BTG4P1-201ENST00000510421 183 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms