Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 OR4K12P-201ENST00000406538 961 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL139039.2-201ENST00000407436 479 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 U3.35-201ENST00000408405 208 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 BMS1P17-202ENST00000416720 316 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC013470.3-201ENST00000420252 1194 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 GTF2IP2-201ENST00000424290 697 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL390879.2-203ENST00000426943 1121 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 MTCO1P57-201ENST00000432182 261 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL450023.3-201ENST00000440592 271 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 EEF1B2P6-201ENST00000445713 673 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL691482.1-201ENST00000453255 87 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC118758.1-202ENST00000454719 225 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 CYCSP53-201ENST00000455540 265 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 RPL7AP28-201ENST00000464513 571 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC008410.1-201ENST00000483777 339 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 RPS4XP18-201ENST00000495480 763 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 RNA5SP271-201ENST00000516700 88 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC090888.3-201ENST00000558917 509 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC012414.2-201ENST00000559474 187 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC015720.2-201ENST00000567709 334 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 ADAD1P2-201ENST00000588476 646 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC073111.2-201ENST00000605657 1075 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL008729.2-201ENST00000606393 473 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC140113.4-201ENST00000622087 222 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC005086.4-201ENST00000623065 213 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC106730.3-201ENST00000624568 641 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 CASC19-204ENST00000641001 2055 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC027279.1-201ENST00000568885 4284 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 RN7SKP224-201ENST00000364140 325 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AL596448.1-201ENST00000415024 392 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 MTND4LP21-201ENST00000415303 295 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC093155.2-201ENST00000420734 937 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC004448.2-201ENST00000422360 586 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 TNPO1P1-201ENST00000423641 1138 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 MTND4P15-201ENST00000437913 1033 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC073052.1-201ENST00000440417 714 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AL691517.1-201ENST00000440833 1235 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 MORF4L1P4-201ENST00000450245 976 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 RPS17P2-201ENST00000461663 408 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 RN7SL799P-201ENST00000475891 298 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 RN7SL817P-201ENST00000480777 288 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 GTF2F2P1-201ENST00000511083 675 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC074087.1-201ENST00000512059 724 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 RNA5SP473-201ENST00000516402 125 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 RNA5SP373-201ENST00000517271 95 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC024940.3-201ENST00000538551 316 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC008126.1-201ENST00000549019 480 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 GLRXP2-201ENST00000555594 321 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC079075.1-201ENST00000559543 878 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 RBM22P1-201ENST00000578589 1214 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC104687.2-201ENST00000604442 342 ntBASIC4.79□□□□□ -1.64
NDE1Q9NXR1 AC007423.1-201ENST00000605009 627 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms