Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RN7SKP166-201ENST00000410812 305 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 IPPKP1-201ENST00000422501 768 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL354766.1-201ENST00000423396 542 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 GTF2IP23-201ENST00000423746 351 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 DPRXP1-201ENST00000426312 460 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 RPL23AP12-201ENST00000467573 473 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL161747.1-201ENST00000480068 358 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL035404.1-201ENST00000497982 568 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 CCDC11P1-201ENST00000503137 1162 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AP000619.3-201ENST00000535634 1127 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 DUXAP1-201ENST00000556632 463 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC023968.1-201ENST00000560719 475 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 MIR4675-201ENST00000577898 77 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 BPTFP1-201ENST00000579209 492 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC060780.2-201ENST00000589047 198 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC005332.4-201ENST00000592752 579 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC090246.1-201ENST00000616499 426 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 DNM1P47-203ENST00000571780 12667 ntBASIC5.77□□□□□ -1.48
CCM2LQ9NUG4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.48
CCM2LQ9NUG4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
CCM2LQ9NUG4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC004656.1-201ENST00000568479 4951 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC068870.3-201ENST00000625077 2536 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 RN7SKP275-201ENST00000364626 301 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 RNU6-317P-201ENST00000384031 107 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 MIR188-201ENST00000385034 86 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 MIR1302-8-201ENST00000408342 128 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC245096.1-201ENST00000413104 546 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 PTP4A1P5-201ENST00000420305 455 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 USP9YP26-201ENST00000421008 661 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AL365203.2-201ENST00000423444 196 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC090018.1-201ENST00000434369 367 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 MTND4P32-201ENST00000437189 1237 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 USP9YP22-201ENST00000438971 294 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AL391987.1-201ENST00000441025 200 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 RPL23AP76-201ENST00000441860 458 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 RPL23AP60-201ENST00000450011 454 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 RPL7AP52-201ENST00000458096 790 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 RN7SL714P-201ENST00000487050 298 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 MTND1P22-201ENST00000510572 951 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 RN7SL475P-201ENST00000583379 298 ntBASIC5.77□□□□□ -1.49
CCM2LQ9NUG4 MIR4443-201ENST00000585052 53 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms