Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC025574.1-201ENST00000554784 1653 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC005261.2-201ENST00000593427 4258 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC016831.4-201ENST00000438302 307 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CISHQ9NSE2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC011005.3-201ENST00000491624 395 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 AL110118.1-201ENST00000553543 400 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC105129.1-201ENST00000560250 297 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC009852.2-201ENST00000567898 485 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 RN7SL652P-201ENST00000577769 300 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 RN7SL435P-201ENST00000584418 282 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 AC098935.2-201ENST00000604222 466 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 OR7A19P-201ENST00000608051 733 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 MIR6730-201ENST00000622213 67 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 AL136164.3-201ENST00000624429 3978 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CISHQ9NSE2 RBPJP2-201ENST00000618187 1444 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CISHQ9NSE2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CISHQ9NSE2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.03□□□□□ -1.6
CISHQ9NSE2 SALL4P2-201ENST00000423288 2910 ntBASIC5.03□□□□□ -1.6
CISHQ9NSE2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CISHQ9NSE2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CISHQ9NSE2 MAPK10-263ENST00000641052 4307 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CISHQ9NSE2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CISHQ9NSE2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CISHQ9NSE2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 RN7SKP103-201ENST00000363848 320 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 NACAP7-201ENST00000407371 609 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 RPL36AP10-201ENST00000421785 322 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AL049745.1-201ENST00000433953 286 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 RPL36AP15-201ENST00000444514 266 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 TDGF1P1-201ENST00000445734 527 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 H2AFZP5-201ENST00000446960 382 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC108463.1-201ENST00000450258 347 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC090142.1-201ENST00000465776 462 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC069304.1-201ENST00000491593 704 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC025164.1-201ENST00000496249 478 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 MIR8069-1-201ENST00000616627 86 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 MIR8069-2-201ENST00000621412 86 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 AC010928.1-201ENST00000592477 1447 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CISHQ9NSE2 AL031119.1-201ENST00000404707 1879 ntBASIC5.02□□□□□ -1.61
CISHQ9NSE2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CISHQ9NSE2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CISHQ9NSE2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CISHQ9NSE2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AL590240.1-201ENST00000334118 313 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AL035419.1-201ENST00000397037 564 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 AL080315.1-201ENST00000406055 466 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 RBMY2KP-201ENST00000418221 992 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC140479.3-201ENST00000418944 1126 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 USP9YP9-201ENST00000429406 715 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC006466.1-201ENST00000438721 289 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC104651.2-201ENST00000447549 528 ntBASIC5.01□□□□□ -1.61
CISHQ9NSE2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.01□□□□□ -1.61
CISHQ9NSE2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms