Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 VN1R34P-201ENST00000447387 883 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RPL36AP33-201ENST00000450395 310 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AL035407.2-201ENST00000454090 378 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 CDC42P1-201ENST00000456658 548 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 OR11I1P-201ENST00000486033 954 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 GM2AP2-201ENST00000491764 562 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 HMGN1P16-201ENST00000508308 283 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RNA5SP400-201ENST00000517155 111 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RN7SKP183-201ENST00000517169 324 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC044913.1-201ENST00000557200 430 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 MIR3912-201ENST00000577566 105 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AL589863.1-201ENST00000595383 631 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC068790.7-201ENST00000602347 528 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC011891.2-201ENST00000604949 397 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC012557.1-201ENST00000607115 611 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC091965.4-201ENST00000607691 587 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 TUG1_1.1-201ENST00000610654 145 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC011815.3-201ENST00000624194 473 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC090181.3-201ENST00000624777 1514 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 PCMTD1P7-201ENST00000634506 357 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC116618.1-201ENST00000634617 774 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC127502.3-201ENST00000636170 1206 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC099654.12-201ENST00000639868 649 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AL137141.1-201ENST00000624622 4836 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 GUCY1B2-204ENST00000531898 1979 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AP005901.5-201ENST00000545779 1796 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 PPBPP2-201ENST00000513150 1362 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 Y_RNA.303-201ENST00000364998 94 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 Y_RNA.390-201ENST00000383932 102 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 SNORA75-201ENST00000384158 137 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MIR433-201ENST00000384837 93 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 RPL23AP59-201ENST00000399415 461 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 PRELID1P1-201ENST00000403549 660 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 RN7SKP33-201ENST00000410942 340 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC116036.1-201ENST00000412199 367 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 CCDC58P2-201ENST00000417131 366 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 RPS26P13-201ENST00000419030 330 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 THEM7P-201ENST00000419556 672 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC004448.2-201ENST00000422360 586 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 OR5AW1P-201ENST00000426334 1006 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 ZNF863P-201ENST00000426746 417 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 CNOT7P1-201ENST00000429006 852 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MTND1P2-201ENST00000430604 821 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 TRIM60P18-201ENST00000441518 828 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC097499.1-201ENST00000444277 208 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 475.4 ms