Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC092045.1-201ENST00000495716 1231 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC080014.1-201ENST00000496877 1201 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC109481.1-201ENST00000509173 282 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC008885.2-201ENST00000509506 930 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 HMGB3P13-201ENST00000511263 607 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC005363.1-201ENST00000530779 351 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC005519.1-201ENST00000554490 601 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 MIR3154-201ENST00000577829 84 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AP005136.2-201ENST00000583253 1049 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC025165.5-201ENST00000602802 578 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC009027.1-201ENST00000604510 479 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC006328.2-201ENST00000623198 397 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC012005.2-201ENST00000624333 397 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC061999.1-201ENST00000624454 177 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC073593.1-201ENST00000624500 411 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC023245.2-201ENST00000530760 2978 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC022031.1-201ENST00000585985 2593 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AL359976.1-201ENST00000418655 3528 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 EIF3EP1-201ENST00000433978 1316 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RNU6-1066P-201ENST00000363573 105 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RNA5SP478-201ENST00000364657 115 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 SNORD116-23-201ENST00000384645 92 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 Y_RNA.560-201ENST00000384689 102 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RNU11-201ENST00000387069 134 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL133264.1-201ENST00000407157 562 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RN7SKP86-201ENST00000410454 332 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 MTND1P20-201ENST00000430341 950 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 PPIAP13-201ENST00000434706 478 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 MTCO2P16-201ENST00000436962 677 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 ARMC4P1-201ENST00000438905 707 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RPL12P11-201ENST00000439970 501 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 PFN1P11-201ENST00000445829 389 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RPS27AP15-201ENST00000447672 466 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC097359.1-201ENST00000447946 463 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AL445687.2-201ENST00000458156 728 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 CR383656.1-201ENST00000484916 377 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 RPS7P6-201ENST00000485777 579 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC093815.1-201ENST00000508637 280 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC091849.1-201ENST00000509920 121 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 SNRPCP6-201ENST00000528310 210 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC007068.2-201ENST00000543168 395 ntBASIC6.36□□□□□ -1.39
TRIM55Q9BYV6 AC024909.2-201ENST00000553035 286 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms