Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL049767.1-202ENST00000637826 242 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 SOCS5P3-201ENST00000425115 1576 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 MTCO1P8-201ENST00000416914 1523 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AC011503.2-201ENST00000594230 1500 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 RN7SKP160-201ENST00000363804 340 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 U3.25-201ENST00000391209 220 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AL080315.1-201ENST00000406055 466 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 VN1R31P-201ENST00000417498 730 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 RCC2P2-201ENST00000422174 918 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 HMGB1P32-201ENST00000425971 565 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 MTCO1P51-201ENST00000427672 1060 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 RPS27P18-201ENST00000431701 247 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AL137845.2-201ENST00000444292 988 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 Z80107.2-201ENST00000445127 392 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 NDUFA5P8-201ENST00000449019 346 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AL389915.2-201ENST00000454576 441 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 OR2AO1P-201ENST00000476497 403 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AC116562.1-201ENST00000485355 781 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 RN7SL558P-201ENST00000497468 299 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AL390334.1-201ENST00000556395 450 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 MIR4691-201ENST00000583764 85 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.06□□□□□ -1.76
HDHD3Q9BSH5 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC108751.5-201ENST00000492880 1336 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 DHX9P1-201ENST00000436565 3076 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 MIR323A-201ENST00000362199 86 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RNA5SP428-201ENST00000365129 132 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 ARL4AP5-201ENST00000404372 599 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RNA5SP345-201ENST00000410646 108 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RN7SKP97-201ENST00000410966 333 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AL121776.1-201ENST00000429337 372 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC097523.2-201ENST00000435551 652 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 MRPL48P1-201ENST00000445390 636 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC144530.1-201ENST00000452862 555 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RPS18P6-201ENST00000476880 458 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RN7SL97P-201ENST00000486780 299 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RN7SL244P-201ENST00000493405 297 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 OR52A4P-203ENST00000498233 1014 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 MRPS33P2-201ENST00000507850 322 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 FKBP1BP1-201ENST00000553366 325 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 TVP23CP2-201ENST00000571473 623 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AL139407.1-201ENST00000613826 1175 ntBASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.05□□□□□ -1.76
HDHD3Q9BSH5 AC006453.5-201ENST00000636451 619 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms