Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 SNORA62.2-201ENST00000364672 152 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 RNU4-2-201ENST00000365668 141 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 RNU6-317P-201ENST00000384031 107 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 MIR551A-201ENST00000385042 96 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 U3.25-201ENST00000391209 220 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 OR3A2-201ENST00000408891 1076 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 CBX1P4-201ENST00000439415 457 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AL162388.1-201ENST00000450912 352 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 VDAC2P4-201ENST00000452925 711 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 OR2AF1P-201ENST00000454899 889 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC006511.1-201ENST00000470614 315 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 ATP5LP5-201ENST00000483050 299 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AL049874.2-201ENST00000492636 288 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 RPL7L1P4-201ENST00000513004 707 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 RNA5SP362-201ENST00000516048 118 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC090819.1-201ENST00000523800 1111 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC084757.1-201ENST00000559987 490 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC015720.2-201ENST00000567709 334 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 MIR4716-201ENST00000579628 84 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC127024.5-201ENST00000580085 462 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 H3F3BP2-201ENST00000583907 357 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC110792.4-201ENST00000609843 298 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 MIR7973-1-201ENST00000614683 76 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC123768.4-201ENST00000616244 701 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 AC116563.2-201ENST00000624751 535 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 OR14L1P-202ENST00000641545 3009 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 ABCC13-202ENST00000463099 3842 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL022322.2-201ENST00000624072 20397 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC092681.1-201ENST00000297369 291 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 GAPDHP24-201ENST00000328713 983 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL009179.1-201ENST00000406085 265 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 RPS20P25-201ENST00000412447 352 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 MTND4P11-201ENST00000417020 1058 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 NDUFB4P8-201ENST00000435351 367 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 NANOGP9-201ENST00000439890 892 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC021660.1-201ENST00000465006 554 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 RN7SL346P-201ENST00000491561 294 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 OR9N1P-202ENST00000494289 481 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 RPS17P5-201ENST00000498293 408 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC021193.1-201ENST00000511607 420 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC022882.1-201ENST00000532142 501 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC137627.1-201ENST00000545761 289 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC040958.1-201ENST00000561102 201 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC012616.1-201ENST00000600294 197 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC017076.1-201ENST00000607613 578 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL355816.1-201ENST00000607951 118 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC100847.1-201ENST00000611316 481 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC025574.2-201ENST00000615621 514 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC004808.2-201ENST00000627965 773 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 AC006453.5-201ENST00000636451 619 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms