Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 OR1L6-202ENST00000373684 1044 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 MIR621-201ENST00000384919 96 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 DBIP1-201ENST00000401435 260 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RN7SKP240-201ENST00000410583 375 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RPL12P9-201ENST00000412942 488 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 SLC20A1P1-201ENST00000413906 956 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RPS24P7-201ENST00000416921 246 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 OR2X1P-201ENST00000421144 687 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC006065.1-201ENST00000422539 802 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AL133173.1-201ENST00000423458 397 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC010099.3-201ENST00000423896 409 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 PCNPP2-201ENST00000441651 455 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RPS10P18-201ENST00000442662 495 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 HMGB1P5-202ENST00000451497 985 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 OR52E3P-201ENST00000452083 936 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 VN1R40P-201ENST00000455196 941 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RPS4XP6-201ENST00000477670 797 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RPS27AP16-201ENST00000492222 470 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 BCAS2P1-201ENST00000528022 632 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 LRRC6P1-201ENST00000532188 885 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RN7SL622P-201ENST00000585292 275 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC012254.4-201ENST00000588843 273 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC068020.1-201ENST00000594215 661 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC130352.1-201ENST00000602979 661 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC079416.3-201ENST00000624479 549 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AP003399.1-201ENST00000637534 361 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC092111.2-201ENST00000611627 1414 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 RN7SKP6-201ENST00000364795 319 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 MIR551A-201ENST00000385042 96 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 U3.23-201ENST00000391132 200 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 RPS3AP2-201ENST00000407190 754 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 FMO7P-201ENST00000436045 768 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC019185.1-201ENST00000442718 389 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC023512.1-201ENST00000444513 499 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 SETD6P1-201ENST00000444575 317 ntBASIC5.59□□□□□ -1.51
ATG4AQ8WYN0 AC004022.1-201ENST00000447766 1066 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms