Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC083899.2-201ENST00000423285 1376 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 RNA5SP319-201ENST00000362768 119 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 U3.3-201ENST00000362986 216 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 RNU4-44P-201ENST00000363050 141 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 U3.25-201ENST00000391209 220 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 MTND2P15-201ENST00000418575 892 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 HSFY1P1-201ENST00000423928 1178 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 ELOCP3-201ENST00000439303 348 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC006326.1-201ENST00000445465 787 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 RANP1-206ENST00000455094 651 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 HMGB3P16-201ENST00000508037 287 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC113192.3-201ENST00000529152 742 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC106785.3-201ENST00000564064 847 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 RPL10P14-201ENST00000565265 298 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC233266.2-201ENST00000567067 528 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AL139022.2-201ENST00000606934 443 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AL096803.3-201ENST00000609032 532 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC109309.2-201ENST00000612597 332 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 TMEM30CP-203ENST00000637814 1035 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A1Q8WWI5 BTBD10P1-201ENST00000549824 1352 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 OR13C3-201ENST00000374781 1108 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 Z86062.1-201ENST00000406773 777 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 RN7SKP293-201ENST00000411389 296 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 RPS11P7-201ENST00000442125 465 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AL591623.2-201ENST00000449978 222 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 MTND6P32-201ENST00000457611 483 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 EIF2S2P5-201ENST00000457635 968 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 TPT1P1-201ENST00000458495 518 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC108729.2-201ENST00000476543 840 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 RN7SL591P-201ENST00000496150 292 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 RFPL4AP5-201ENST00000514977 504 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 RNA5SP362-201ENST00000516048 118 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC008126.1-201ENST00000549019 480 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 FO393422.1-201ENST00000603908 708 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC015849.2-201ENST00000605738 409 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC010245.2-201ENST00000606908 1167 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AP005432.2-201ENST00000608162 586 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AL645927.2-201ENST00000618350 349 ntBASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 AC010872.1-201ENST00000624225 675 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms