Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 AC119674.1-204ENST00000641348 1343 ntBASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
SHKBP1Q8TBC3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 PNKDP1-201ENST00000435914 430 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL645936.1-201ENST00000441979 518 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL592437.1-201ENST00000443781 492 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 GDI2P2-201ENST00000445131 608 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL050341.1-201ENST00000447743 313 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 Z99127.3-201ENST00000448158 395 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 RPS20P24-201ENST00000457473 361 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AC022206.1-201ENST00000495947 347 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AK4P6-201ENST00000505168 528 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 SNX18P24-201ENST00000505249 671 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AC073358.1-201ENST00000505671 684 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 IGBP1P5-201ENST00000507524 1000 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 SETP21-201ENST00000514799 892 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 MIR4701-201ENST00000583094 63 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AL049634.3-201ENST00000604968 457 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AC002553.4-201ENST00000616896 331 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 OR1N1-202ENST00000619659 939 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AP001264.1-201ENST00000620602 703 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AC109454.4-201ENST00000623411 649 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 MTND5P42-201ENST00000637720 498 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 SAGE3P-201ENST00000619800 1635 ntBASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHKBP1Q8TBC3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 MRRFP1-201ENST00000435941 1675 ntBASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SHKBP1Q8TBC3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 MIR323B-201ENST00000385269 82 ntBASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 SNORD65C-201ENST00000390962 71 ntBASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 RPL7AP14-201ENST00000424041 802 ntBASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AC005189.1-201ENST00000431286 310 ntBASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AC003989.1-201ENST00000434569 565 ntBASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.71□□□□□ -1.34
SHKBP1Q8TBC3 DPPA3P1-201ENST00000448050 469 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms