Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 TDGF1P1-201ENST00000445734 527 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 RPL21P6-201ENST00000479171 504 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC008410.1-201ENST00000483777 339 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AL136038.1-201ENST00000497246 351 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 TCP11X3P-202ENST00000514289 1254 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AP002373.2-201ENST00000541631 1060 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 RNA5SP440-201ENST00000612665 119 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC127024.6-201ENST00000621598 424 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AC006453.5-201ENST00000636451 619 ntBASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
NUDCD3Q8IVD9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RNU6-1331P-201ENST00000363658 106 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AL136116.2-201ENST00000404020 785 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RPL12P43-201ENST00000420608 499 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RPL7L1P9-201ENST00000431298 745 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RPS29P14-201ENST00000431518 171 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RAB9AP5-201ENST00000437794 597 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RAB9AP2-201ENST00000443911 597 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AL161636.2-201ENST00000445179 927 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RPS27AP2-201ENST00000457576 465 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RPL23AP37-201ENST00000479658 549 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 RNU4-18P-201ENST00000516751 149 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC107918.3-201ENST00000533272 382 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 SNORA74C-1-201ENST00000580726 201 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 EIF1P5-201ENST00000585002 234 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC010615.3-201ENST00000597319 394 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC105254.2-201ENST00000603636 436 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC136428.4-201ENST00000634254 1155 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AC011493.1-201ENST00000596753 1632 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUDCD3Q8IVD9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 VN1R31P-201ENST00000417498 730 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 KNOP1P3-201ENST00000446933 426 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 RN7SL184P-201ENST00000488308 297 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 RPS4XP18-201ENST00000495480 763 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 RN7SL558P-201ENST00000497468 299 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 RNU6-709P-201ENST00000517257 104 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AP002981.1-201ENST00000517692 975 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 NMNAT1P1-201ENST00000554095 876 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC090888.3-201ENST00000558917 509 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC095055.1-201ENST00000603472 1113 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms