Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AP001642.1-201ENST00000624727 2117 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 OR9K1P-201ENST00000326513 941 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 RNA5SP27-201ENST00000363839 119 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC234772.1-201ENST00000377927 937 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC245060.4-201ENST00000413293 1121 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC115285.1-201ENST00000424879 736 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 HMGB3P24-201ENST00000433260 622 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC073465.2-201ENST00000440938 498 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 RPL31P44-201ENST00000447680 377 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 NPM1P39-201ENST00000449818 867 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 RPL21P6-201ENST00000479171 504 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC104687.1-201ENST00000485829 412 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 RPS27AP16-201ENST00000492222 470 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC010374.1-201ENST00000503762 1237 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 MIR7853-201ENST00000584820 132 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC015802.2-201ENST00000589690 189 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AL138895.2-201ENST00000603019 178 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 MIR7973-1-201ENST00000614683 76 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 FRG1HP-204ENST00000617940 757 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC073569.3-201ENST00000619055 682 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC090772.4-201ENST00000623599 362 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AC126544.2-201ENST00000625174 749 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 AL445984.1-201ENST00000637834 659 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.71□□□□□ -1.5
CCDC38Q502W7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC38Q502W7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC38Q502W7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL731566.1-201ENST00000620490 1937 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC38Q502W7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC38Q502W7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 SNORA64.1-201ENST00000362600 132 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 LYPLA1P3-201ENST00000402650 695 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AK4P4-201ENST00000419465 646 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC079807.1-201ENST00000429993 481 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC011242.1-201ENST00000433596 1158 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 RPS7P2-201ENST00000435134 607 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 NPM1P33-201ENST00000438918 872 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 HMGN1P2-201ENST00000445197 310 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC073909.1-201ENST00000447112 999 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AL596266.1-201ENST00000448132 400 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 RPS23P6-201ENST00000466136 431 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 RPS17P15-201ENST00000475609 349 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 RN7SL346P-201ENST00000491561 294 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC079064.1-201ENST00000528365 362 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AP000648.1-201ENST00000529682 397 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 OR5AM1P-201ENST00000532136 1032 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 AP002812.4-201ENST00000532139 286 ntBASIC5.7□□□□□ -1.5
CCDC38Q502W7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC38Q502W7 NANOGNBP2-201ENST00000544753 553 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms