Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPS17P8-201ENST00000434525 335 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.67□□□□□ -1.5
GABPAQ06546 NDUFA12P1-201ENST00000455914 406 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 RN7SL354P-201ENST00000469282 294 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.67□□□□□ -1.5
GABPAQ06546 AC234775.3-201ENST00000564612 656 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.67□□□□□ -1.5
GABPAQ06546 AP005212.4-201ENST00000614206 710 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 BX005214.3-202ENST00000619809 325 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GABPAQ06546 AC010435.1-201ENST00000623353 1177 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 AP003400.2-201ENST00000624036 666 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.67□□□□□ -1.5
GABPAQ06546 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.67□□□□□ -1.5
GABPAQ06546 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GABPAQ06546 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.66□□□□□ -1.5
GABPAQ06546 AC063976.2-201ENST00000425667 3556 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
GABPAQ06546 AC120036.2-201ENST00000509729 1474 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
GABPAQ06546 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 AC126755.2-208ENST00000327792 462 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 AC138969.1-213ENST00000331436 462 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GABPAQ06546 AC069213.2-201ENST00000420238 366 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 AC016831.4-201ENST00000438302 307 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.66□□□□□ -1.5
GABPAQ06546 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.66□□□□□ -1.5
GABPAQ06546 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.66□□□□□ -1.5
GABPAQ06546 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.66□□□□□ -1.5
GABPAQ06546 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.66□□□□□ -1.5
GABPAQ06546 SNRPCP3-201ENST00000474888 476 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 AC135999.1-201ENST00000478962 479 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 CEACAMP10-202ENST00000495431 496 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.66□□□□□ -1.5
GABPAQ06546 MYL12BP2-201ENST00000503948 512 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 AC073358.1-201ENST00000505671 684 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 RNU2-30P-201ENST00000516209 141 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 RNU4-18P-201ENST00000516751 149 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 RN7SKP5-201ENST00000517045 272 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 RNU6-709P-201ENST00000517257 104 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.66□□□□□ -1.5
GABPAQ06546 AC093249.4-201ENST00000564755 259 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 SNORA74C-1-201ENST00000580726 201 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 MIR5096-201ENST00000583713 70 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 AC021106.3-201ENST00000623925 531 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.66□□□□□ -1.5
GABPAQ06546 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.66□□□□□ -1.5
GABPAQ06546 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 AL442639.1-201ENST00000625030 1899 ntBASIC5.66□□□□□ -1.5
GABPAQ06546 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
GABPAQ06546 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.66□□□□□ -1.5
GABPAQ06546 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
GABPAQ06546 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GABPAQ06546 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GABPAQ06546 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.65□□□□□ -1.5
GABPAQ06546 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
GABPAQ06546 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.65□□□□□ -1.5
GABPAQ06546 OR4K15-201ENST00000305051 1216 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GABPAQ06546 RPS3AP23-201ENST00000401762 784 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
GABPAQ06546 RN7SKP106-201ENST00000410832 272 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.65□□□□□ -1.5
GABPAQ06546 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.65□□□□□ -1.5
GABPAQ06546 MRPS21P2-201ENST00000424704 264 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 MRPL35P2-201ENST00000448009 511 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 AL356981.1-201ENST00000454879 684 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 AL133372.1-201ENST00000493565 745 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.65□□□□□ -1.5
GABPAQ06546 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.65□□□□□ -1.5
GABPAQ06546 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.65□□□□□ -1.5
GABPAQ06546 AP000619.2-201ENST00000546014 969 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 MIR4433B-201ENST00000581329 102 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.65□□□□□ -1.5
GABPAQ06546 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.65□□□□□ -1.5
GABPAQ06546 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GABPAQ06546 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.65□□□□□ -1.5
GABPAQ06546 AL353684.1-201ENST00000622677 1120 ntBASIC5.65□□□□□ -1.5
GABPAQ06546 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.65□□□□□ -1.5
GABPAQ06546 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GABPAQ06546 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms