Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
UBE3AQ05086 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 AL078621.3-201ENST00000623707 2042 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
UBE3AQ05086 SNURFL-201ENST00000309296 343 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
UBE3AQ05086 RNU6-532P-201ENST00000384318 107 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 HSPA8P15-201ENST00000401676 786 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 NUDT19P3-201ENST00000404698 555 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 RNU4-27P-201ENST00000410889 139 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.7□□□□□ -1.5
UBE3AQ05086 AC245028.1-201ENST00000423259 256 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.7□□□□□ -1.5
UBE3AQ05086 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.7□□□□□ -1.5
UBE3AQ05086 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.7□□□□□ -1.5
UBE3AQ05086 IGBP1P3-201ENST00000447449 1000 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 CLIC4P1-201ENST00000453177 535 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 AZGP1P2-201ENST00000454506 345 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 SNORD125-201ENST00000459538 96 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.7□□□□□ -1.5
UBE3AQ05086 AC105233.1-201ENST00000498840 781 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.7□□□□□ -1.5
UBE3AQ05086 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.7□□□□□ -1.5
UBE3AQ05086 AC006518.1-201ENST00000541449 943 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.7□□□□□ -1.5
UBE3AQ05086 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 ABI1P1-201ENST00000603375 1120 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 AL049844.2-201ENST00000604280 628 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 AC093799.2-201ENST00000610062 578 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 AP000943.4-201ENST00000622912 357 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 MTCO1P4-201ENST00000520516 1409 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 AL138820.1-201ENST00000617901 5305 ntBASIC5.7□□□□□ -1.5
UBE3AQ05086 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
UBE3AQ05086 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UBE3AQ05086 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.7□□□□□ -1.5
UBE3AQ05086 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBE3AQ05086 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3AQ05086 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3AQ05086 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3AQ05086 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3AQ05086 AL031595.2-201ENST00000624215 19071 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AC010266.2-201ENST00000564741 3255 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3AQ05086 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3AQ05086 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
UBE3AQ05086 GVINP1-202ENST00000531871 7271 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AC020633.1-201ENST00000468439 2247 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 RNU6-252P-201ENST00000363232 107 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 RNA5SP123-201ENST00000363244 119 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 RNA5SP87-201ENST00000384155 118 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 MIR105-1-201ENST00000385222 81 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 RNU6-244P-201ENST00000391028 104 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 XKRYP4-201ENST00000414395 483 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AL606495.1-201ENST00000422100 813 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 DDX39BP1-205ENST00000422507 192 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AL360081.1-201ENST00000428299 555 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE3AQ05086 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE3AQ05086 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE3AQ05086 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
UBE3AQ05086 XKRYP5-201ENST00000449659 483 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3AQ05086 RN7SL188P-201ENST00000469842 285 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AC092754.1-201ENST00000472975 479 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE3AQ05086 AC025459.1-201ENST00000504072 156 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE3AQ05086 AC018442.3-201ENST00000523025 183 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AC122688.1-201ENST00000541494 223 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AP002373.2-201ENST00000541631 1060 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3AQ05086 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3AQ05086 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3AQ05086 MIR4675-201ENST00000577898 77 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 MIR4330-201ENST00000579077 105 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3AQ05086 RN7SL356P-201ENST00000582228 248 ntBASIC5.69□□□□□ -1.5
UBE3AQ05086 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE3AQ05086 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE3AQ05086 AC005252.1-201ENST00000604518 1063 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms