Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 AC027575.3-201ENST00000583058 2747 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CLRN1P58418 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 AC005539.1-201ENST00000443768 1479 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.4□□□□□ -1.54
CLRN1P58418 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.4□□□□□ -1.54
CLRN1P58418 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.4□□□□□ -1.54
CLRN1P58418 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLRN1P58418 RNU105B-201ENST00000364478 208 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.4□□□□□ -1.54
CLRN1P58418 RN7SKP59-201ENST00000410520 314 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 RNU6-77P-201ENST00000410554 91 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 NPM1P11-201ENST00000417106 855 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 THEM7P-201ENST00000419556 672 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 RPS15AP30-201ENST00000420976 390 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC012519.1-201ENST00000424588 610 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC130360.1-201ENST00000425489 1117 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 FAM96AP1-201ENST00000430879 482 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 CACYBPP1-201ENST00000438592 684 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 AP000936.2-201ENST00000447151 681 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AL162739.1-201ENST00000450606 307 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.4□□□□□ -1.54
CLRN1P58418 RN7SL254P-201ENST00000460609 284 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC104689.1-201ENST00000473356 768 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AL035690.1-201ENST00000490892 383 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC083795.1-201ENST00000491760 320 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 RN7SL362P-201ENST00000494228 267 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 RPS6P4-201ENST00000494693 758 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC111193.1-201ENST00000504097 155 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC010424.1-201ENST00000506336 297 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC008885.2-201ENST00000509506 930 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 RN7SKP67-201ENST00000515905 235 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 NDUFA5P2-201ENST00000519723 344 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC008429.4-201ENST00000521201 182 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC130365.2-201ENST00000525882 1201 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.4□□□□□ -1.54
CLRN1P58418 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.4□□□□□ -1.54
CLRN1P58418 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.4□□□□□ -1.54
CLRN1P58418 MRPS21P8-201ENST00000569196 235 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.4□□□□□ -1.54
CLRN1P58418 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 uc_338.29-201ENST00000615099 168 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLRN1P58418 AC006338.2-201ENST00000616864 791 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.4□□□□□ -1.54
CLRN1P58418 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
CLRN1P58418 AC006840.1-201ENST00000623069 542 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 AC092184.1-201ENST00000625042 715 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.4□□□□□ -1.54
CLRN1P58418 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.4□□□□□ -1.54
CLRN1P58418 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.4□□□□□ -1.54
CLRN1P58418 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 AC022325.1-201ENST00000502748 2199 ntBASIC5.4□□□□□ -1.55
CLRN1P58418 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 AL137100.1-201ENST00000556703 1620 ntBASIC5.4□□□□□ -1.55
CLRN1P58418 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
CLRN1P58418 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 AL355377.1-201ENST00000621125 1653 ntBASIC5.4□□□□□ -1.55
CLRN1P58418 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.4□□□□□ -1.55
CLRN1P58418 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLRN1P58418 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLRN1P58418 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLRN1P58418 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.39□□□□□ -1.55
CLRN1P58418 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms