Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
VCPP55072 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VCPP55072 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
VCPP55072 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.49□□□□□ -1.53
VCPP55072 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 SMG1P7-201ENST00000565246 2704 ntBASIC5.49□□□□□ -1.53
VCPP55072 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VCPP55072 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 RN7SKP95-201ENST00000362860 303 ntBASIC5.49□□□□□ -1.53
VCPP55072 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VCPP55072 AL078599.1-201ENST00000402075 293 ntBASIC5.49□□□□□ -1.53
VCPP55072 CYP4F29P-201ENST00000420685 446 ntBASIC5.49□□□□□ -1.53
VCPP55072 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.49□□□□□ -1.53
VCPP55072 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.49□□□□□ -1.53
VCPP55072 CYCSP42-201ENST00000450823 238 ntBASIC5.49□□□□□ -1.53
VCPP55072 AC021660.1-201ENST00000465006 554 ntBASIC5.49□□□□□ -1.53
VCPP55072 RN7SL423P-201ENST00000486202 304 ntBASIC5.49□□□□□ -1.53
VCPP55072 AC023424.1-201ENST00000496058 459 ntBASIC5.49□□□□□ -1.53
VCPP55072 ENPP7P11-201ENST00000505915 627 ntBASIC5.49□□□□□ -1.53
VCPP55072 AC100784.1-201ENST00000522790 310 ntBASIC5.49□□□□□ -1.53
VCPP55072 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.49□□□□□ -1.53
VCPP55072 AP002373.2-201ENST00000541631 1060 ntBASIC5.49□□□□□ -1.53
VCPP55072 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.49□□□□□ -1.53
VCPP55072 AC234775.3-201ENST00000564612 656 ntBASIC5.49□□□□□ -1.53
VCPP55072 AC022884.2-201ENST00000578535 580 ntBASIC5.49□□□□□ -1.53
VCPP55072 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VCPP55072 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.49□□□□□ -1.53
VCPP55072 MIR5096-201ENST00000583713 70 ntBASIC5.49□□□□□ -1.53
VCPP55072 MIR4737-201ENST00000583979 81 ntBASIC5.49□□□□□ -1.53
VCPP55072 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 AL109618.2-201ENST00000605527 211 ntBASIC5.49□□□□□ -1.53
VCPP55072 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VCPP55072 SOCS5P3-201ENST00000425115 1576 ntBASIC5.49□□□□□ -1.53
VCPP55072 AC097461.1-201ENST00000568928 2821 ntBASIC5.49□□□□□ -1.53
VCPP55072 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 THAP12P4-201ENST00000528321 2266 ntBASIC5.49□□□□□ -1.53
VCPP55072 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 AC112198.2-201ENST00000426589 6996 ntBASIC5.49□□□□□ -1.53
VCPP55072 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VCPP55072 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VCPP55072 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
VCPP55072 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VCPP55072 AC073136.1-201ENST00000449426 2884 ntBASIC5.48□□□□□ -1.53
VCPP55072 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VCPP55072 MIR589-201ENST00000385238 99 ntBASIC5.48□□□□□ -1.53
VCPP55072 AL049693.1-201ENST00000402760 611 ntBASIC5.48□□□□□ -1.53
VCPP55072 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.48□□□□□ -1.53
VCPP55072 GTF2IP2-201ENST00000424290 697 ntBASIC5.48□□□□□ -1.53
VCPP55072 AC046176.1-201ENST00000435260 1170 ntBASIC5.48□□□□□ -1.53
VCPP55072 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 AL513533.1-201ENST00000453728 415 ntBASIC5.48□□□□□ -1.53
VCPP55072 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.48□□□□□ -1.53
VCPP55072 Z92846.1-201ENST00000456203 268 ntBASIC5.48□□□□□ -1.53
VCPP55072 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.48□□□□□ -1.53
VCPP55072 AC079168.1-201ENST00000458741 345 ntBASIC5.48□□□□□ -1.53
VCPP55072 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.48□□□□□ -1.53
VCPP55072 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.48□□□□□ -1.53
VCPP55072 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.48□□□□□ -1.53
VCPP55072 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.48□□□□□ -1.53
VCPP55072 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.48□□□□□ -1.53
VCPP55072 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.48□□□□□ -1.53
VCPP55072 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VCPP55072 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.48□□□□□ -1.53
VCPP55072 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VCPP55072 AC127024.5-201ENST00000580085 462 ntBASIC5.48□□□□□ -1.53
VCPP55072 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.48□□□□□ -1.53
VCPP55072 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 AC011626.1-201ENST00000604710 562 ntBASIC5.48□□□□□ -1.53
VCPP55072 MIR6780A-201ENST00000615089 68 ntBASIC5.48□□□□□ -1.53
VCPP55072 MTCO1P1-201ENST00000624263 1081 ntBASIC5.48□□□□□ -1.53
VCPP55072 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VCPP55072 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VCPP55072 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
VCPP55072 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.48□□□□□ -1.53
VCPP55072 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VCPP55072 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VCPP55072 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.47□□□□□ -1.53
VCPP55072 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.47□□□□□ -1.53
VCPP55072 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.47□□□□□ -1.53
VCPP55072 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VCPP55072 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VCPP55072 RNA5SP455-201ENST00000365190 119 ntBASIC5.47□□□□□ -1.53
VCPP55072 MIR1193-201ENST00000408109 78 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms