Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC027455.1-201ENST00000574104 594 ntBASIC4.74□□□□□ -1.65
GTF2A1P52655 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.74□□□□□ -1.65
GTF2A1P52655 RN7SL708P-201ENST00000580952 299 ntBASIC4.74□□□□□ -1.65
GTF2A1P52655 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.74□□□□□ -1.65
GTF2A1P52655 AC011487.3-201ENST00000593607 453 ntBASIC4.74□□□□□ -1.65
GTF2A1P52655 AC015804.1-201ENST00000622935 435 ntBASIC4.74□□□□□ -1.65
GTF2A1P52655 OR52B5P-202ENST00000641118 1110 ntBASIC4.74□□□□□ -1.65
GTF2A1P52655 OR8A1-204ENST00000642111 1145 ntBASIC4.74□□□□□ -1.65
GTF2A1P52655 AC027279.1-201ENST00000568885 4284 ntBASIC4.74□□□□□ -1.65
GTF2A1P52655 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
GTF2A1P52655 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
GTF2A1P52655 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GTF2A1P52655 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GTF2A1P52655 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.74□□□□□ -1.65
GTF2A1P52655 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
GTF2A1P52655 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
GTF2A1P52655 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 PANDAR-201ENST00000629595 1506 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GTF2A1P52655 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
GTF2A1P52655 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GTF2A1P52655 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GTF2A1P52655 RN7SKP124-201ENST00000364730 341 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 RN7SKP6-201ENST00000364795 319 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 RNA5SP345-201ENST00000410646 108 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.73□□□□□ -1.65
GTF2A1P52655 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 RGS17P1-201ENST00000423358 553 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 AL512637.1-201ENST00000439523 1231 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.73□□□□□ -1.65
GTF2A1P52655 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.73□□□□□ -1.65
GTF2A1P52655 EXTL2P1-201ENST00000446218 416 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 RN7SL189P-201ENST00000468631 289 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GTF2A1P52655 S100A11P1-201ENST00000477525 312 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 LSM3P4-201ENST00000502948 309 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 AC020593.1-201ENST00000507399 299 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.73□□□□□ -1.65
GTF2A1P52655 AC018442.3-201ENST00000523025 183 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 AC027369.2-201ENST00000528030 440 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 AC068305.2-201ENST00000550567 1205 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 AL845552.1-201ENST00000556820 323 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 CYP4A43P-201ENST00000568156 121 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 MIR4644-201ENST00000579929 84 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 AC087565.3-203ENST00000641018 837 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 HSPA8P1-201ENST00000425843 1833 ntBASIC4.73□□□□□ -1.65
GTF2A1P52655 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
GTF2A1P52655 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GTF2A1P52655 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GTF2A1P52655 RN7SKP171-201ENST00000364417 303 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 OR7E101P-201ENST00000400428 513 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 VN1R8P-201ENST00000407739 893 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AL035660.1-201ENST00000422041 222 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 COX6CP13-201ENST00000428703 226 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.72□□□□□ -1.65
GTF2A1P52655 ELOCP8-201ENST00000439309 332 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 ELOCP15-201ENST00000442090 332 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC091180.1-201ENST00000462104 372 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GTF2A1P52655 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
GTF2A1P52655 RNU6-964P-201ENST00000516524 69 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC091515.1-201ENST00000548110 679 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC009101.1-201ENST00000568135 242 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 MIR3154-201ENST00000577829 84 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 AC008759.1-201ENST00000589783 983 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC005479.3-201ENST00000602790 431 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.72□□□□□ -1.65
GTF2A1P52655 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.72□□□□□ -1.65
GTF2A1P52655 MTND4P10-201ENST00000446199 1363 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 RLIMP2-201ENST00000427891 1563 ntBASIC4.72□□□□□ -1.65
GTF2A1P52655 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
GTF2A1P52655 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
GTF2A1P52655 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GTF2A1P52655 YES1P1-201ENST00000418510 1628 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms