Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AL354714.3-201ENST00000447284 493 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC022431.1-201ENST00000450941 438 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CR1P49238 RPS21P4-201ENST00000487122 248 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC024558.1-201ENST00000505008 528 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 RN7SKP260-201ENST00000516907 149 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.39□□□□□ -1.71
CX3CR1P49238 OR4A46P-201ENST00000527255 933 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC107918.3-201ENST00000533272 382 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC116553.2-201ENST00000564203 463 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC097505.1-201ENST00000610199 565 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC126915.2-201ENST00000610957 190 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC008115.4-201ENST00000619780 775 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 OR52B5P-202ENST00000641118 1110 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC068446.1-201ENST00000556425 1549 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 CASC19-281ENST00000642118 1554 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CR1P49238 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CX3CR1P49238 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CX3CR1P49238 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 SNORA73.1-201ENST00000363107 205 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 LRRC37BP1-201ENST00000398851 714 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 EIF4A1P1-201ENST00000420241 934 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 CHEK2P5-201ENST00000423877 246 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 NPM1P22-201ENST00000427761 952 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CR1P49238 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 SCAND3P1-201ENST00000439854 1060 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 RPL12P11-201ENST00000439970 501 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 RPS29P9-201ENST00000440360 171 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CR1P49238 FAR2P1-206ENST00000449736 709 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 RPL10P17-201ENST00000453852 316 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 GYG1P1-201ENST00000460864 698 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 UBA52P7-201ENST00000486088 380 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 RN7SL591P-201ENST00000496150 292 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CR1P49238 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.38□□□□□ -1.71
CX3CR1P49238 MTCO3P42-201ENST00000509488 518 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 MTCO3P39-201ENST00000514812 518 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 RFPL4AP5-201ENST00000514977 504 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AC012339.2-201ENST00000523996 453 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AC012146.2-201ENST00000576545 416 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 FAM60CP-201ENST00000591086 664 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AC011445.2-201ENST00000599274 173 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AL512329.2-201ENST00000607350 548 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AC007620.3-201ENST00000608131 497 ntBASIC4.38□□□□□ -1.71
CX3CR1P49238 AC099494.2-201ENST00000623371 978 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms