Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SDAD1P1-202ENST00000524156 2051 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD4P46934 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD4P46934 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NEDD4P46934 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD4P46934 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD4P46934 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD4P46934 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD4P46934 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD4P46934 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD4P46934 AC017079.1-201ENST00000333650 415 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 RN7SKP103-201ENST00000363848 320 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 BX510359.2-201ENST00000417920 305 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 VN1R37P-201ENST00000419096 748 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 RPL7P57-201ENST00000423238 740 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 AL451139.1-201ENST00000434718 346 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.63□□□□□ -1.51
NEDD4P46934 GYG1P1-201ENST00000460864 698 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD4P46934 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD4P46934 RNA5SP303-201ENST00000516192 130 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.63□□□□□ -1.51
NEDD4P46934 OR5M2P-201ENST00000529003 936 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.63□□□□□ -1.51
NEDD4P46934 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.63□□□□□ -1.51
NEDD4P46934 AC087477.6-201ENST00000559595 843 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 AC098935.2-201ENST00000604222 466 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 AP005212.4-201ENST00000614206 710 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 OR8G7P-201ENST00000616658 848 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 MIR6853-201ENST00000619642 74 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEDD4P46934 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.63□□□□□ -1.51
NEDD4P46934 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.63□□□□□ -1.51
NEDD4P46934 DHX9P1-201ENST00000436565 3076 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 AC005005.4-201ENST00000623789 16698 ntBASIC5.63□□□□□ -1.51
NEDD4P46934 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NEDD4P46934 AL034370.1-201ENST00000397254 1590 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEDD4P46934 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.62□□□□□ -1.51
NEDD4P46934 AC007382.1-201ENST00000624376 2618 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
NEDD4P46934 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.62□□□□□ -1.51
NEDD4P46934 SALL4P2-201ENST00000423288 2910 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 DDX18P5-201ENST00000534547 1306 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AL590240.1-201ENST00000334118 313 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEDD4P46934 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEDD4P46934 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEDD4P46934 MIR585-201ENST00000384887 94 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AL035419.1-201ENST00000397037 564 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 MIR1271-201ENST00000408537 86 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 EIF4HP2-201ENST00000424380 563 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.62□□□□□ -1.51
NEDD4P46934 RPS26P4-201ENST00000431743 355 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.62□□□□□ -1.51
NEDD4P46934 AC097523.2-201ENST00000435551 652 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.62□□□□□ -1.51
NEDD4P46934 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.62□□□□□ -1.51
NEDD4P46934 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.62□□□□□ -1.51
NEDD4P46934 AC023424.1-201ENST00000496058 459 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AC073358.1-201ENST00000505671 684 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 OR51A1P-201ENST00000511110 946 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.62□□□□□ -1.51
NEDD4P46934 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.62□□□□□ -1.51
NEDD4P46934 RNA5SP464-201ENST00000516251 108 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.62□□□□□ -1.51
NEDD4P46934 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NEDD4P46934 AL110118.1-201ENST00000553543 400 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.62□□□□□ -1.51
NEDD4P46934 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.62□□□□□ -1.51
NEDD4P46934 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.62□□□□□ -1.51
NEDD4P46934 AC125494.2-201ENST00000602431 657 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AC116651.1-201ENST00000609724 556 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 AC015804.1-201ENST00000622935 435 ntBASIC5.62□□□□□ -1.51
NEDD4P46934 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEDD4P46934 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NEDD4P46934 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NEDD4P46934 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.62□□□□□ -1.51
NEDD4P46934 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.61□□□□□ -1.51
NEDD4P46934 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.61□□□□□ -1.51
NEDD4P46934 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD4P46934 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 AL139128.1-201ENST00000413921 941 ntBASIC5.61□□□□□ -1.51
NEDD4P46934 RPL36AP10-201ENST00000421785 322 ntBASIC5.61□□□□□ -1.51
NEDD4P46934 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.61□□□□□ -1.51
NEDD4P46934 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD4P46934 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD4P46934 AP000926.3-201ENST00000497201 299 ntBASIC5.61□□□□□ -1.51
NEDD4P46934 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.61□□□□□ -1.51
NEDD4P46934 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.61□□□□□ -1.51
NEDD4P46934 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD4P46934 AC008676.3-201ENST00000521237 435 ntBASIC5.61□□□□□ -1.51
NEDD4P46934 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD4P46934 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD4P46934 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.61□□□□□ -1.51
NEDD4P46934 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD4P46934 AC068790.7-201ENST00000602347 528 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms