Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RN7SL515P-201ENST00000463999 297 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 AC079841.1-201ENST00000481228 950 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 AC069304.1-201ENST00000491593 704 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 AC006499.3-201ENST00000506077 748 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN6P29350 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN6P29350 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.86□□□□□ -1.63
PTPN6P29350 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN6P29350 RNA5SP228-201ENST00000516232 133 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 RNA5SP92-201ENST00000516437 110 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 AC105031.1-201ENST00000518550 476 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN6P29350 RPL23AP53-201ENST00000521854 457 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN6P29350 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.86□□□□□ -1.63
PTPN6P29350 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN6P29350 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.86□□□□□ -1.63
PTPN6P29350 AC034236.3-201ENST00000605999 461 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.86□□□□□ -1.63
PTPN6P29350 AL139407.1-201ENST00000613826 1175 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 MIR6719-201ENST00000622428 87 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
PTPN6P29350 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PTPN6P29350 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.86□□□□□ -1.63
PTPN6P29350 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PTPN6P29350 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.86□□□□□ -1.63
PTPN6P29350 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PTPN6P29350 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTPN6P29350 AC010329.2-201ENST00000595195 2737 ntBASIC4.86□□□□□ -1.63
PTPN6P29350 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PTPN6P29350 AL450326.2-201ENST00000421913 1962 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
PTPN6P29350 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTPN6P29350 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC017079.1-201ENST00000333650 415 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 RNU6-1251P-201ENST00000364502 107 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 MIR105-1-201ENST00000385222 81 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 OR8V1P-201ENST00000395193 873 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 NUDT19P3-201ENST00000404698 555 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 RPS4XP16-201ENST00000427198 791 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 MRPL35P2-201ENST00000448009 511 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 FAR2P1-206ENST00000449736 709 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC020779.1-201ENST00000478757 796 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 LARP7P4-201ENST00000481075 878 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 RN7SL727P-201ENST00000482164 296 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC015864.1-201ENST00000496512 544 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC072052.1-201ENST00000496556 306 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 OR7E10P-201ENST00000526420 991 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC068993.1-201ENST00000546724 589 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 AL512310.9-201ENST00000553311 948 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 AGGF1P9-201ENST00000561884 913 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.85□□□□□ -1.63
PTPN6P29350 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 BNIP3P35-201ENST00000604530 490 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC015914.2-201ENST00000618167 288 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 AC090527.3-201ENST00000619041 548 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 CASC19-221ENST00000641309 1382 ntBASIC4.85□□□□□ -1.63
PTPN6P29350 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN6P29350 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN6P29350 AC008079.2-201ENST00000623543 20396 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms