Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.36□□□□□ -1.23
VARSP26640 AC098799.3-201ENST00000506095 438 ntBASIC7.36□□□□□ -1.23
VARSP26640 AC131392.1-201ENST00000506490 633 ntBASIC7.36□□□□□ -1.23
VARSP26640 AC138866.2-201ENST00000508650 584 ntBASIC7.36□□□□□ -1.23
VARSP26640 GUSBP9-201ENST00000510138 584 ntBASIC7.36□□□□□ -1.23
VARSP26640 AC105417.1-201ENST00000514691 285 ntBASIC7.36□□□□□ -1.23
VARSP26640 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.36□□□□□ -1.23
VARSP26640 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.36□□□□□ -1.23
VARSP26640 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.36□□□□□ -1.23
VARSP26640 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.36□□□□□ -1.23
VARSP26640 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.36□□□□□ -1.23
VARSP26640 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.36□□□□□ -1.23
VARSP26640 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.36□□□□□ -1.23
VARSP26640 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.36□□□□□ -1.23
VARSP26640 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.36□□□□□ -1.23
VARSP26640 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.36□□□□□ -1.23
VARSP26640 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.36□□□□□ -1.23
VARSP26640 ARGFXP2-201ENST00000579304 949 ntBASIC7.36□□□□□ -1.23
VARSP26640 AP001180.3-201ENST00000582221 145 ntBASIC7.36□□□□□ -1.23
VARSP26640 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.36□□□□□ -1.23
VARSP26640 DPPA3P3-201ENST00000603842 430 ntBASIC7.36□□□□□ -1.23
VARSP26640 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.36□□□□□ -1.23
VARSP26640 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARSP26640 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.36□□□□□ -1.23
VARSP26640 AC234782.5-201ENST00000617723 324 ntBASIC7.36□□□□□ -1.23
VARSP26640 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.36□□□□□ -1.23
VARSP26640 PART1_3.1-201ENST00000619680 131 ntBASIC7.36□□□□□ -1.23
VARSP26640 AL451054.1-201ENST00000621770 772 ntBASIC7.36□□□□□ -1.23
VARSP26640 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.36□□□□□ -1.23
VARSP26640 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
VARSP26640 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VARSP26640 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.36□□□□□ -1.23
VARSP26640 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.36□□□□□ -1.23
VARSP26640 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
VARSP26640 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
VARSP26640 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARSP26640 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.35□□□□□ -1.23
VARSP26640 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.35□□□□□ -1.23
VARSP26640 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.35□□□□□ -1.23
VARSP26640 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
VARSP26640 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
VARSP26640 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.35□□□□□ -1.23
VARSP26640 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 PSMC1P7-201ENST00000495689 1315 ntBASIC7.35□□□□□ -1.23
VARSP26640 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.35□□□□□ -1.23
VARSP26640 RNU6-582P-201ENST00000362989 107 ntBASIC7.35□□□□□ -1.23
VARSP26640 Y_RNA.231-201ENST00000364358 102 ntBASIC7.35□□□□□ -1.23
VARSP26640 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VARSP26640 SNORD115.1-201ENST00000391109 76 ntBASIC7.35□□□□□ -1.23
VARSP26640 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 RPS4XP8-201ENST00000402039 771 ntBASIC7.35□□□□□ -1.23
VARSP26640 KRT18P52-201ENST00000404956 846 ntBASIC7.35□□□□□ -1.23
VARSP26640 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 AL450338.1-201ENST00000407987 512 ntBASIC7.35□□□□□ -1.23
VARSP26640 U3.31-201ENST00000408113 216 ntBASIC7.35□□□□□ -1.23
VARSP26640 GAS8-AS1-201ENST00000408886 435 ntBASIC7.35□□□□□ -1.23
VARSP26640 RN7SKP225-201ENST00000410405 352 ntBASIC7.35□□□□□ -1.23
VARSP26640 Y_RNA.618-201ENST00000410949 107 ntBASIC7.35□□□□□ -1.23
VARSP26640 RPLP1P10-201ENST00000413972 339 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 NDUFB4P5-201ENST00000415445 361 ntBASIC7.35□□□□□ -1.23
VARSP26640 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.35□□□□□ -1.23
VARSP26640 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.35□□□□□ -1.23
VARSP26640 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VARSP26640 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.35□□□□□ -1.23
VARSP26640 MTCYBP9-201ENST00000431021 303 ntBASIC7.35□□□□□ -1.23
VARSP26640 ATP5JP1-201ENST00000431631 322 ntBASIC7.35□□□□□ -1.23
VARSP26640 RPEP2-201ENST00000432149 701 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC099344.1-201ENST00000433548 492 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.35□□□□□ -1.23
VARSP26640 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.35□□□□□ -1.23
VARSP26640 AL031736.1-201ENST00000449688 618 ntBASIC7.35□□□□□ -1.23
VARSP26640 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 AC004692.1-201ENST00000455430 424 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARSP26640 MTND4P17-201ENST00000470444 350 ntBASIC7.35□□□□□ -1.23
VARSP26640 RN7SL282P-201ENST00000479676 297 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC106872.3-201ENST00000495104 446 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 GAPDHP61-201ENST00000507324 1005 ntBASIC7.35□□□□□ -1.23
VARSP26640 KLHL2P1-201ENST00000508691 521 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC026700.1-201ENST00000512074 544 ntBASIC7.35□□□□□ -1.23
VARSP26640 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 AC104136.1-201ENST00000512969 394 ntBASIC7.35□□□□□ -1.23
VARSP26640 RNU4-49P-201ENST00000516080 140 ntBASIC7.35□□□□□ -1.23
VARSP26640 RN7SKP256-201ENST00000517201 314 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 IGLV10-67-201ENST00000519446 325 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.35□□□□□ -1.23
VARSP26640 AL117187.1-201ENST00000555482 181 ntBASIC7.35□□□□□ -1.23
VARSP26640 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 284.5 ms